Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01007 ATGTCCAGATATTGTGCGCAGACCATCCTCTCAATGGAACCTGCTTCGTTTGCTATTGCAGGAATCTTAGCTCTGCTAATTTCATACAAAGTGTTAATTAGGTTCATTAGATCTCCTAATGGATCTTCCAAACAAAAAAAGGGTGCCGAAGTACCCGAACCTCGTGGTGCTTTACCTTTCATAGGTCACCTCCATCTTCTGAATGCTAGAATACCCTATTTCAGGACCTTCTCAGCCATGGCTGAGAAATATGGTCCAATTTTCTGTGTCAGACTGGGTTGCCACCCCACCATTGTGGTGAACAGCAGGGAAATTGCCAAGGAGTGTCTCACAACAAATGACAGAGTTTTTGCCTCAAGGCCAATCACTTCTGCTGGGAGACTCCTAGGTTACAACAATGCAATATTTGGCCTTGCCCCTTACGGAAATTACTGGCGTGAGATCAGAAAAATGTCTGTTCTTGAGATTTTCTCAAGCTATAGGCTTGAGAAGCTAAAGCATGTGAGAGACACTGAAACACTGTCTCTTGTGAAGGACTTGTACTCATCAATATCATCATCTGCAAAGAACGTGAAGGGCTCAGCTGAAGTGAGTATAAGCAATGTGTTGGAGCACATGACCTTCAATGTAATTGTGAGAATGATAGCTGGGAAGAGATTTGGAGGGGACACAGTAAATGAAGAAGATAATGACGCATGGAAGCTGAGGAAAGCCATAAAAGATGCCACGTATCTGTTTGGTGTTTTTGTGGTGGCTGATGCAATTCCATCTCTTAGTTGGTTTGATTTTCAGGGCTACGTGAGTTTCATGAAAAGAACAGCTAAGCAAACTGACATAATTCTTGAGAAGTGGCTTGAAGAACATCTAAGAGAGAGAGTGAGAGATGGTAAGTGTGAAAGGGACTTCATGGATGTGATGATATCAGCTTTTGAAGAGCAAGAAGAGATTTGTGGCTATAAGAAGGAGACTGTTATCAAAGCAACAGCAATGATGCTAATCCTCACTGGTTCAGGAAGCACAGCTATGACACTAACATGGGCACTCTCCTTGCTCCTAAACCATCCAAAGGTTCTAAAGGTTGCTCAAAGAGAATTGGACACCCACGTAGGACAAGAAAGATGGGTCCAAGAATCTGACATAAAAAACCTCAATTATCTTCATGCCATTATCAAAGAGACCCTTCGTTTGTACCCACCTGCACCCTTAACAGGAATCAGGGAGATCATGGAAGATTGCTCTTTGGTAGGGTACCATGTCCCGAAGGGAACACGTTTGCTCATTAACTTATGGAACTTGCAAAGGGACCCAAAATTATGGTCTAACCCTAATGAGTTTCAGCCAGAGAGGTTCCTCACCACTCACAGAGACATTGATTATATGAGTCAAGACTTTGAGTTAATTCCATTTAGCTTTGGAAGAAGGTCGTGCCCTGGCATGGCATTTGGGCTGCAAGTGACGCACTTGACCTTGGCTCGGTTGCTTCAAGGGTTTGATCTGAGCACAAAGGATGGTGTTGAGGTTGATATGGGTGAAGGGTTAGGAGTGGCCTTGCCTAAGGAAGGTGGACTTCGAGTTGTGCTACAACCACGTCTTCCATTGGAGCTTTATGAAAGCCTTTGA 1620 0.4377 MSRYCAQTILSMEPASFAIAGILALLISYKVLIRFIRSPNGSSKQKKGAEVPEPRGALPFIGHLHLLNARIPYFRTFSAMAEKYGPIFCVRLGCHPTIVVNSREIAKECLTTNDRVFASRPITSAGRLLGYNNAIFGLAPYGNYWREIRKMSVLEIFSSYRLEKLKHVRDTETLSLVKDLYSSISSSAKNVKGSAEVSISNVLEHMTFNVIVRMIAGKRFGGDTVNEEDNDAWKLRKAIKDATYLFGVFVVADAIPSLSWFDFQGYVSFMKRTAKQTDIILEKWLEEHLRERVRDGKCERDFMDVMISAFEEQEEICGYKKETVIKATAMMLILTGSGSTAMTLTWALSLLLNHPKVLKVAQRELDTHVGQERWVQESDIKNLNYLHAIIKETLRLYPPAPLTGIREIMEDCSLVGYHVPKGTRLLINLWNLQRDPKLWSNPNEFQPERFLTTHRDIDYMSQDFELIPFSFGRRSCPGMAFGLQVTHLTLARLLQGFDLSTKDGVEVDMGEGLGVALPKEGGLRVVLQPRLPLELYESL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01007 539 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Lapu10g01007 539 SUPERFAMILY Cytochrome P450 52 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 CDD CYP82 85 530 - -
Lapu10g01007 539 Gene3D Cytochrome P450 38 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 PANTHER CYTOCHROME P450 82C3-RELATED 33 536 - -
Lapu10g01007 539 Pfam Cytochrome P450 52 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 FunFam Cytochrome P450 82C4 41 528 - -
Lapu10g01007 539 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01007 539 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01007 Lapu-Chr10 11845039 11847927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01007 52 536 Cytochrome P450 AT4G31940 49.493 2.66e-167 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01007 K17961 - gmx:100806378 874.774