Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01006 ATGGATCTTGCTTCCTATCTCCAAACTTTTGCAGGAATCTTAGCTTTGATTGCATACACTGTGTTTAGATCCATTAAGTCCTCTAATGGATATAAACAAAGAAAGGGTACCAAACTACCTGAACCACCTGGTGCTTTACCTTTCATAGGTCACCTCCATCTTCTGAATGCTAGAATACCCTATTTCAGGACCTTCTCAGCCATGGCTGAGAAATATGGTCCAATTTTCTGTGTCAGACTGGGTTGCCACCCCACCATTGTGGTGAACAGCAGGGAAATTGCCAAGGAGTGTCTCACAACAAATGACAGAGTTTTTGCCTCAAGGCCAATCACTTCTGCTGGGAGACTCCTAGGTTACAACAATGCAGTATTTGGCCTTGCCCCTTACGGAAATTACTGGCGTGAGATCAGAAAAATGGCTGTTCTTGAGATTTTATCAAGCTATAGGCTTGAGAAGCTAAAGCATGTGAGAGACACTGAAACACTGTCTCTTGTGAAGGACTTGTACTCATCAATATCATCATCTGTAAAGAACGTGAAGGGCTCAGCTGAAGTGAGTATAAGCAATGTGTTGGAGCACATGACCTTCAATGTAATTGTGAGAATGATAGCTGGGAAGAGATTTGGAAGGGACACAGTAAATGAAGAAGATAATGACGCGTGGAAGCTGAGGAAATCCATAAAAGATGCCACGTATCTGTGTGGTGTTTTTGTGGTGGCTGATGCAATTCCATCCCTTAGTTGGTTTGATTTCCAAGGGCATGTGAGTTTCATGAAAAGAACAGCTAAGAAACTGGACGTTATCCTTGAGAAGTGGCTGGAAGAACACATGAAAATGAGAGGGGAGAAGAAGAATGGTGGATGTGAAAGAGACTTCATGGATGTAATGTTGTCATCTTTTGAAGAGCAAGAAGATATCTGTGGCTATAAGAGGGAGACAGTCATCAAAGCAACATCACTGCTGCTTGTCCTTACTGGTTCAGGAAGCACAGCCATATCCCTAACTTGGGCACTCTCCTTACTCCTAAACCACCCGAAGGTACTAAAGACAGCACAACAAGAACTGGACACCAACATAGGAAAAGAAAGATGGGTCCAAGAATCTGACATCAAAAACCTTAATTTTCTCAATGCCATTATCAAAGAGACCCTTCGTTTGTACCCACCAGCACCCTTAACAGGAATCAGGGAAGCCATGGAGGAGTGTTGTGTGGCAGGGTACCATGTCCCAAAGGGAGCACGTTTGCTTATTAACCTGTGGCAGCTGCAAAGGGACCAACAAGTATGGTCCAACCCTAATGAGTTTAACCCAGAGAGGTTCCTCACAACTCATCAAGACACTGACTTTATGAGCCAGAACTTCGAGTTAATTCCATTTAGCTTTGGAAGAAGGTCATGCCCAGGCTTGACATTTGGGCTACAAGTGCTGCACTTGACCCTGGCTCGGTTGATTCAAGGGTTTGATATGTGCACCAAGGATGGTGCTCAAGTTGATATGACTGAAGGGTTAGGAGTGGCTTTGCCTAAGGAAAACGAACTCCGAATCACACTTCAACCACGTCTTCCATTGAAGCTTTATGAAAGCCTTTGA 1590 0.4396 MDLASYLQTFAGILALIAYTVFRSIKSSNGYKQRKGTKLPEPPGALPFIGHLHLLNARIPYFRTFSAMAEKYGPIFCVRLGCHPTIVVNSREIAKECLTTNDRVFASRPITSAGRLLGYNNAVFGLAPYGNYWREIRKMAVLEILSSYRLEKLKHVRDTETLSLVKDLYSSISSSVKNVKGSAEVSISNVLEHMTFNVIVRMIAGKRFGRDTVNEEDNDAWKLRKSIKDATYLCGVFVVADAIPSLSWFDFQGHVSFMKRTAKKLDVILEKWLEEHMKMRGEKKNGGCERDFMDVMLSSFEEQEDICGYKRETVIKATSLLLVLTGSGSTAISLTWALSLLLNHPKVLKTAQQELDTNIGKERWVQESDIKNLNFLNAIIKETLRLYPPAPLTGIREAMEECCVAGYHVPKGARLLINLWQLQRDQQVWSNPNEFNPERFLTTHQDTDFMSQNFELIPFSFGRRSCPGLTFGLQVLHLTLARLIQGFDMCTKDGAQVDMTEGLGVALPKENELRITLQPRLPLKLYESL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01006 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Lapu10g01006 529 CDD CYP82 73 520 - -
Lapu10g01006 529 PANTHER CYTOCHROME P450 82C3-RELATED 16 526 - -
Lapu10g01006 529 Pfam Cytochrome P450 40 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 Gene3D Cytochrome P450 24 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 SUPERFAMILY Cytochrome P450 40 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g01006 529 FunFam Cytochrome P450 82C4 29 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01006 Lapu-Chr10 11829599 11832969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g01006 40 526 Cytochrome P450 AT4G31970 49.395 1.43e-166 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01006 K17961 - gmx:100806378 879.782