Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00999 ATGAAATACAAGTTTAAAAATGTTGGCATCACTTGTGATGTTCCAGACATTGAATATCATTCTTCTAAAAATTACATTTCTTTTAAAAGTAGAAAGTTGAAATTTGATGAACTTTTGAATGCATTAACAGATGACAACAACTATATGATTGGATTGCAAGGGATGGGGGGCATAGGTAAAACAACATTAGCAAAAGAGATGGGTAAGGAGCTTAAGAAATCAAAATATTTTGATCAAGTCATTGATACTACAGTATCTAATACCCCTGATATAAAAAAGATTCAAGATGATATTGCGGGACCATTAGGATTGTCATTGAAGGCTTGTACTGAATCAGAAAGGCCTAGGAGGTTGTGGAATAGATTGACAAATGGTGAGAAGATTCTTGTAATTCTGGATGATGTGTGGGGTGATATAAGTTTTGAAGAAATAGGTATTCCATTTAAGGATAACCACAATGGTTGTAGAATTCTTGTGACCACCCGCAATATGAGCATATGCAACAAAATAGAATGTGAGAAGATAATTCAACTTGATATCTTACCTGAGGAAGAGGGATGGACATTGTTCCAAAAACATGCAGGTTTAAGTGATAATTTCTCTAAAAGTATTTTTGATAAAGGTCGCAAAATTTGCAAAGAATGTAAAGGATTGCCAATTGCAATTGCAGTTATTGCTGGTAGTTTAAAAGGCCTACGATGTCCAAAAGAATGGAGTGTAGCCTTAAAATCCTTGCAAAAGTCCATGCCCCTTCATGGTGATGATGAAAATTGGAGTGAAGTTTATAAATGTCTGAGGTATAGTTATGACTATATGAAGAATAAAACAGCCAAACAATTGTTCCTTTTATGTTCTCTGTTTCGAGAAGATGAAGAATTGTCTGAAGAAATTTTAGTCAGACTTGCCATAGGAGCGGGCCTTGTTGAGAAAATTGATGATGATTATAGTTACGATGCATGTCGCAATGAAGTAATTGTAGCAAAATATAAACTCATAGATTCATGTTTATTATTGAATGGTGAATTTGGAGAAGTAAAAATGCATGATTTGGTTCGTGAAGTGGCTTTATTGATAGCTAACAAGGAGATTCTAGCAATGAACACATCTAACAAGAATGAAATGACAATGGTTAAAAAGAGGCAGAATATTAAATATTTGTTGTGTAAAGGCAAGAGCATGGATCTGTTTTCCTTGAAGTTTGATGGATCTAAACTTGATATTTTAATTGTCTACTTGAATGAAAATGACTATGTGGAAGTCCAAAATTCATTCTTTGAAAATATAACAAGGCTTCGAGTTTTGTATTTATCAAACGAGACCTACCAACAAGCAACTCTATCATTACCACAGTCAATTCAGTCATTGACCAATATCCGGTCCTTATACCTTCAAGGATTCAACTTAGGTGACATCTCTATTCTTGGAAACCTACAGGGCCTTGAGACTCTCGAGTTGGTTAAATGTTGGTTAGATAAACTGCCAAGAAAGATTGCAAAATTCGGGAAACTTAAATTGTTGAAGTTGAAATATTGTAAATTTGAAAGCCATAATCCAATAGAAGTGATTCAATTTTGCACTTCATTGGAAGAATTGTACTTAATTTGTAATCCCATTTCAATAATGCCCCATAATATGAAGCTTCCTAACTATCAAAGGTTTTCTATATTGGACAGTTCTGGCTATCTCTTTATCACCAAGGAATGGTTTGTGAGGAATTCCCTAGATATTTTCATGGCTGATAAAGTTTTTTCTGAAGAGACATTCAAGTATCTAGTGCGGAAAGCAGAATTTCTTAGTTTAAGGGGACTTGGAGGAGTATGGAAAAATCTCATACCTGAGATTATTTTGCCTGATGATGAAGGTACGAATAATCTAGTTGAGATTGTTTTGAAAGGTATTTCACAACTGATATGCTTAATTGACAACAATGATTCTCGTGTTAAAAGTGTCTTATCCATGTTGGTTGAACTTCAACTTGAAGAAATGAAAAATTTAAAAGAAATATGCAGTGGACCCCTTCCCTTTGAGCTTATGAAAAATTTAGAGCGATTGACTCTTCGTGAGTGTATACATTTAGAAGGCATATTGTTTAAGAGTAGGCTATCCCTCTATAATCTTAAGCAAGTGCTCTTATTCAAGTGTCCAATGTTGACATCTCTATTTGAGTTGTCCACTGCACAATGTCTATTGTTGTTGGAGGAATTGTGTATAGAGAGTTGTGAACAATTGAAAAGTATAATAAGAGATGAAAACAAAAGGAAAGATTCAGGAGAAGAAAGTGTTGATGATGCTCATAACAATAGCAAGAGTTTCACTTTAGCCTTTCCAAATTTAACCACTCTCAAGGTCTTAAACTGTCCCCAATTACAATTCATATTTCCGGTGGTTGTTGCTCAAGATGTTCCAAAACTTCAAGTTATGGAAATAAGGCGGTGTAATAGACTAAAATACTTATTTGGATCATTCCAACATAAGCATGAAGAGGGCGATTTGCATAGGCAATTAAAAGATGTCATATTCACTACTCTAAAACAAGTTATTCTAGAAGACTTGCCTAATTTTGTAGACATTTTTGAGGAATGTGATGAACCCATATCTTCATCAGTAAGTAGGTCATCTTCTCAAGATGAGTCTAAGGCAGAAATAGAATCAAAGGCCAAGAAATGCAAGATTTTAGATTTCATCCATAAATATAGAAGAAAGTGGAGGACTACCAAGATCCCTTTAGATTCCAAGGATCAACTGCAAGACTCTTCTCTCTCATTGGTAAATGACTCCAATACAAATGATGTGATTCCAGAAGAAATGTCAGTGTTTTTGTACAACATTGTAATGAATGATACACCTCACACAACGGTGGGATCCAAAATTTATTTTACTCTTCAAATCCTCACGGAGTTAACAATTTACCAATGTGAAAAAATTGAAGTAATATTTTGTGCTTCTATGTTGGAGTGCTTACCATATCTGCATACACTTGCCATATTTGGATGCAATGAATTGAAACAGATAATTGGCGGGGATACAAAGAATCAGATAAAGCCATTTTTCCCAAGGCTAAAGGTACTTCTGATATCAGAATGCAACAAATTGATATGCGTCTTTCCTATTTCAATTTCCAAAATGGTACCCAAGTTAGAAGTTCTGGTGATCATAAAAGCATCTATGCTAGAGGAAGTATTCGAAGGAGACAGTGATAAAAAAGTTGAGATTCCAAATCTGAAAACTGCAGTACTTGGTGAACTTCCAAGTCTTTCCCAGGAAATTGAATTTCGTACTGCAAAAGATTGTTTGGTGAAGAATTGTCCCAAACTTTCCTTCTCTTCATCGCTTCCAAGTTTCCAACATCTTAGTAATTCTATCGAAGGTACTATATACGACATTTTTACAAATTACGCATTGGTTTTGCATTAG 3414 0.3453 MKYKFKNVGITCDVPDIEYHSSKNYISFKSRKLKFDELLNALTDDNNYMIGLQGMGGIGKTTLAKEMGKELKKSKYFDQVIDTTVSNTPDIKKIQDDIAGPLGLSLKACTESERPRRLWNRLTNGEKILVILDDVWGDISFEEIGIPFKDNHNGCRILVTTRNMSICNKIECEKIIQLDILPEEEGWTLFQKHAGLSDNFSKSIFDKGRKICKECKGLPIAIAVIAGSLKGLRCPKEWSVALKSLQKSMPLHGDDENWSEVYKCLRYSYDYMKNKTAKQLFLLCSLFREDEELSEEILVRLAIGAGLVEKIDDDYSYDACRNEVIVAKYKLIDSCLLLNGEFGEVKMHDLVREVALLIANKEILAMNTSNKNEMTMVKKRQNIKYLLCKGKSMDLFSLKFDGSKLDILIVYLNENDYVEVQNSFFENITRLRVLYLSNETYQQATLSLPQSIQSLTNIRSLYLQGFNLGDISILGNLQGLETLELVKCWLDKLPRKIAKFGKLKLLKLKYCKFESHNPIEVIQFCTSLEELYLICNPISIMPHNMKLPNYQRFSILDSSGYLFITKEWFVRNSLDIFMADKVFSEETFKYLVRKAEFLSLRGLGGVWKNLIPEIILPDDEGTNNLVEIVLKGISQLICLIDNNDSRVKSVLSMLVELQLEEMKNLKEICSGPLPFELMKNLERLTLRECIHLEGILFKSRLSLYNLKQVLLFKCPMLTSLFELSTAQCLLLLEELCIESCEQLKSIIRDENKRKDSGEESVDDAHNNSKSFTLAFPNLTTLKVLNCPQLQFIFPVVVAQDVPKLQVMEIRRCNRLKYLFGSFQHKHEEGDLHRQLKDVIFTTLKQVILEDLPNFVDIFEECDEPISSSVSRSSSQDESKAEIESKAKKCKILDFIHKYRRKWRTTKIPLDSKDQLQDSSLSLVNDSNTNDVIPEEMSVFLYNIVMNDTPHTTVGSKIYFTLQILTELTIYQCEKIEVIFCASMLECLPYLHTLAIFGCNELKQIIGGDTKNQIKPFFPRLKVLLISECNKLICVFPISISKMVPKLEVLVIIKASMLEEVFEGDSDKKVEIPNLKTAVLGELPSLSQEIEFRTAKDCLVKNCPKLSFSSSLPSFQHLSNSIEGTIYDIFTNYALVLH* 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00999 1137 PRINTS Disease resistance protein signature 215 229 - -
Lapu10g00999 1137 PRINTS Disease resistance protein signature 122 136 - -
Lapu10g00999 1137 PRINTS Disease resistance protein signature 799 815 - -
Lapu10g00999 1137 PRINTS Disease resistance protein signature 49 64 - -
Lapu10g00999 1137 FunFam Probable disease resistance protein At1g61300 16 174 - -
Lapu10g00999 1137 Pfam NB-ARC domain 35 270 IPR002182 GO:0043531
Lapu10g00999 1137 Gene3D Ribonuclease Inhibitor 388 759 IPR032675 -
Lapu10g00999 1137 SUPERFAMILY RNI-like 955 1063 - -
Lapu10g00999 1137 Gene3D - 180 273 IPR042197 -
Lapu10g00999 1137 Gene3D Ribonuclease Inhibitor 909 1076 IPR032675 -
Lapu10g00999 1137 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 284 IPR027417 -
Lapu10g00999 1137 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 932 1107 - -
Lapu10g00999 1137 SUPERFAMILY L domain-like 346 819 - -
Lapu10g00999 1137 Gene3D - 11 177 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00999 Lapu-Chr10 11723358 11727579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00999 50 468 WRKY Transcription Factor Family AT5G45050 24.605 5.69e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00999 - - var:108346730 1484.93