Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00988 ATGACCTCATCAACCCCTTCTATGGAATTCAAGTCCTCATTATCCAAACTCCCAACCATGTACGGTGTGCTCATAAACTTCGCTGGAGAAGACATCCGTAGGAAATTTGTTTCTCATCTTGATTCTGCTCTCTCGTCCGTTGGATTCATCACTTTCCTTCACGAAGAGAATGCAGTGAAAGAAATGAACATCCAACAACCTATTCTCAATCTCTGTCGGGTAGCCATTGTTGTTTTCACCAAAACCTATTCTCAATCTGCTTGGTGTCTCAATCAACTTCAACAAATCATTACATGGCACCAAACTTACTCCCGACATGTTCTGCCCGTATATTACGAAGTTGAGCCATCTGATGTCCGTCTTCAGAACGGTGATGTTGGAAAAGCCTTCAAAGCAACTGCACAGCAAACATTCTCAGGACAACAATTGGAGCATGCCATGTCCAGCTGGAGCCATGCACTAACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGAAATTACAGGAGTGATGCTGAACTAGTGGACACCATTGTTGAGAGCGTTCTTAATTTACCACTCTTGTCTGTTACTAAATTTCCAGTTGGATTACAATCCCGCGTGGAAGATGTGATTCGAACTATCAAAAAAAATTCCACAAGTGTTCATATTATAGGGATAAGTGGAATGGGAGGATGTGGTAAAACCACCATTGCCAAAGCCGTCTACCATCAAATCCATGCTACATTCGAGAAGAAAAGTTTCATTGAAGATATTGCACAAGTTAGTCAAACAAGACGGTATATTGATTTACAAGCACAACTTCTTTCTGATGTCCTAGAAAAGAAGATAGAGATAAGTAGTGTTCTGAAGGAAGCAAGTATGATTTCGAAAAGACTTTCTGGGAAGAGGGTGCTCATTGTACTTGACGATATGAATGAGTATAGTCCATTATGGGAAAGTCTTGAATGGTTCGGTAAAGGAACTGTAATAATAATTACAACAAGACAACAAAAACTACTGAGTATAAGTCAAGTTGATTCTGTTTTCCGGATAGATCCAATGAACGCAAACGAGTCCCTTGAACTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAAGAATATAATTACCTTGCTGAAAGAGTGGCTGCTTACTGTGGAGGGGTACCTCTAGCTCTTGAGGTCATTGGAAGTAGTTTATTTGAAAGGACGAAAGAAGAATGGAATAGTGTATTGTTAAAATTAAAGAACATACCCGAGCATGAACTTTGTCAGAAATTGAAAATAAGCTTCGACGGTTTAGGCAATCAAATGGAAAAAGATTTATTCCTTGAAGTATGTTACTTCTATCTTGGCAAACGCAGAGCGTATGTTACGAAAATCCTAAATGGCTGTGGAATAGACGCTGATAATGGAATAAGAGTTCTCATAGAGCGTGGCCTCATAAAAGTTACGAAGAACAACAGATGTAGAATGGATCCTATGCTAGTAGAAATGGGAATAGGAATTATTCATGAAATTTCAGGAAAGGAACCTGAGAAGAAAACTCGAATGTGGTTTGATGAGGATGAAAAATATGTATTGACTGACAATACAAGGTCAAAAGCAATTCAGGGGTTGCCTACGAAACTGCCTTCAGCCAGAAGAGATTGCTTCGAACCTTATCCTTTAGAGATAAGAGACAGATCTAGACTGTTGCAACTAGATGAAGCGCAACTGGCTGTAAATTCTGAGCACCATTTTCAGAAACTGAGATGGATAAGGTTGCATGGGTCTTCTTCAGCAAACCTACATAACAACTTTTATCTTCGCGATGCAACATCGATTAATTTAAAACAGAGTCTTCTTCAACTCGTCCAGAATGAACCCCAGGTTTTGAGGTGGCTAGAAGTCCTTGATCTTAGTCACTCTCAGTATTTAACAGAAACCCCTGACTTTTCCGAACTGCCGAGTCTTGAACAGCTCATTCTGAAAGATTGCCCAAGATTGCGCGAAGTACACCAATCTATTGAATGTCTCAGCAATCTTATACTGCTGAATTTGAAGGACTGTACGAGTCTAAGCAATCTCACCAGAGAGGTATATAAGTTGAAATCTTTAAAAACTCTCATTCTGTCTGGTTGTTCGAAGATTGACGTATTGGAGAAATATATAGTGCGAATGGAATCGTTGATAACTTTAGTTGCTGAAAACACAGCAGTGAAAGAAGTGCCCCTTTCAATTGTAAGCTCAAAAAGCATTGGATATATATCCCTGCGTGGATTTGAGGGATTGTCACATCATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCGCCAAGAATGAATCACCTATCTTATATTCATTCGTCTTGTATGGATATGGATAATAGTTGGGATGATATTGCGCCATTACTGAGCAGCCTTGAAAATCTTCGAAGTGTTATGGTGCAATGTGACACCGAGTTTCAACTATTCAAACAAGTTACAACTATTCTGGTCGAGCATGGTGTAAATATTACAGAATCAGGAATTTCAAAGCATCACCTCAGGTCTTCTCTGATTGGTCTTGGAACATGCAATGAATTCTTCAATACTGTCAGTGCTAGCATATCTGAGGTATTGGGGACCAATGAATCGTGTGGTGTTCTCCCAGGTGATAATGATCTTTATTGGTTGGCCCATATGGGTGAGGGACATTCAGTTTACTTCACTGTGCCTGAGGATCGTGACATGATGGGAATGGCTTTGGGTGTTGTTTATTTATCAGTCCCTGAAATCTTGGCAACTGATTGTCTTACAAGCGTCATAATTGTTAATTACACAAAGTGCACACTGCAGATACACAAGCAAGGCACAGTAATTTCCTTTAATGATGAAGATTGGCGTGGCATAAAGTCGAATTTAGGACGTGGAGAGAAGGTGGAGATTTTTATGAGTTTTGGTGAAGGACTGGTGGTCAAGAACACAGCTGTCTATCTGATATGTGGTGAATCAAATAACTCGGAAAAAGTGCTTGAGCAAAAGAAAAAGAAACTTTCCCTCGTTAGATTCATAAAGAAAATTGTAATGTGA 3042 0.3961 MTSSTPSMEFKSSLSKLPTMYGVLINFAGEDIRRKFVSHLDSALSSVGFITFLHEENAVKEMNIQQPILNLCRVAIVVFTKTYSQSAWCLNQLQQIITWHQTYSRHVLPVYYEVEPSDVRLQNGDVGKAFKATAQQTFSGQQLEHAMSSWSHALTKAANFFGWDERNYRSDAELVDTIVESVLNLPLLSVTKFPVGLQSRVEDVIRTIKKNSTSVHIIGISGMGGCGKTTIAKAVYHQIHATFEKKSFIEDIAQVSQTRRYIDLQAQLLSDVLEKKIEISSVLKEASMISKRLSGKRVLIVLDDMNEYSPLWESLEWFGKGTVIIITTRQQKLLSISQVDSVFRIDPMNANESLELLSWHAFREAKPKEEYNYLAERVAAYCGGVPLALEVIGSSLFERTKEEWNSVLLKLKNIPEHELCQKLKISFDGLGNQMEKDLFLEVCYFYLGKRRAYVTKILNGCGIDADNGIRVLIERGLIKVTKNNRCRMDPMLVEMGIGIIHEISGKEPEKKTRMWFDEDEKYVLTDNTRSKAIQGLPTKLPSARRDCFEPYPLEIRDRSRLLQLDEAQLAVNSEHHFQKLRWIRLHGSSSANLHNNFYLRDATSINLKQSLLQLVQNEPQVLRWLEVLDLSHSQYLTETPDFSELPSLEQLILKDCPRLREVHQSIECLSNLILLNLKDCTSLSNLTREVYKLKSLKTLILSGCSKIDVLEKYIVRMESLITLVAENTAVKEVPLSIVSSKSIGYISLRGFEGLSHHLFPSIIRSWMSPRMNHLSYIHSSCMDMDNSWDDIAPLLSSLENLRSVMVQCDTEFQLFKQVTTILVEHGVNITESGISKHHLRSSLIGLGTCNEFFNTVSASISEVLGTNESCGVLPGDNDLYWLAHMGEGHSVYFTVPEDRDMMGMALGVVYLSVPEILATDCLTSVIIVNYTKCTLQIHKQGTVISFNDEDWRGIKSNLGRGEKVEIFMSFGEGLVVKNTAVYLICGESNNSEKVLEQKKKKLSLVRFIKKIVM* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00988 1013 Pfam NB-ARC domain 199 413 IPR002182 GO:0043531
Lapu10g00988 1013 Gene3D - 348 431 IPR042197 -
Lapu10g00988 1013 SMART till_3 20 160 IPR000157 GO:0007165
Lapu10g00988 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 731 IPR044974 GO:0006952
Lapu10g00988 1013 SUPERFAMILY L domain-like 557 825 - -
Lapu10g00988 1013 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Lapu10g00988 1013 Gene3D - 185 342 IPR027417 -
Lapu10g00988 1013 Gene3D Ribonuclease Inhibitor 557 861 IPR032675 -
Lapu10g00988 1013 PRINTS Disease resistance protein signature 217 232 - -
Lapu10g00988 1013 PRINTS Disease resistance protein signature 292 306 - -
Lapu10g00988 1013 PRINTS Disease resistance protein signature 382 396 - -
Lapu10g00988 1013 PRINTS Disease resistance protein signature 691 707 - -
Lapu10g00988 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 440 IPR027417 -
Lapu10g00988 1013 Pfam TIR domain 21 189 IPR000157 GO:0007165
Lapu10g00988 1013 Gene3D - 19 184 IPR035897 -
Lapu10g00988 1013 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 163 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00988 Lapu-Chr10 11520543 11524704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00988 21 737 WRKY Transcription Factor Family AT4G12020 27.260 3.85e-59 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00988 - - vun:114165123 1279.23