Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00987 GATGACAAGTCCGGGTGGACTAACGCACTCACCAAAGTTGCGAATCTCTTTGGATGGGATGAGAGCAATTACAGGAGTGACGCTGAACTAGTGGACGCAATTGTTAAGAGCGTTCTTAATTTACCAGTCTTGTCTGCCACTAAATTTCCAGTTGGATTACTATACCAAGTGGAAGATGTGATTCGAACCATAAAAAATAAATCCACCGAAGTTTGTACGATAGGGATATGTGGAATGGGAGGATCTGGTAAAACCACCCTTGCCAAAGCCATCTACTGTGAAATTCATGGTACATTCACGGAGAAAAGTTTCATTGAAGATATTGCAGAAATTAGTCATACAAGAGGGGTTATTTATTTACAAAAACAACTTTTTTCAGATGTCCTAAAAACAAAGGTGGAGATACGTAGCGTTGAGATGGGAATAAGTACGATTCGGGAAAGACTTTTTGGGAAAAGGGTGCTCATTGTACTTGACGATGTGAATGAGTATGGTCCATTATTTGACCTATTGGAAAGTCGTGCATTGTTCGGTAAAGGATCCGTAATAATAATCACTACAGAAAATGAATACCTACTGAGCAATCTTCAACTTGATTCTGTTTTTCAGACAAATCTAATGAACACAAACGAGTCCTTTCAGCTTCTCAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAAGAATACAGAGATCTTGCAGCAAGAGTGGTTGTTTATTGTGGAGGACAAGCTCTAGCTCTTGAAGTCATTGGAAGTGGTTTATTTGAAAGGACGAAAGAAGAATGGAATAGTCTATTGTTAAAATTAGAGAAAATTCCCCCGCATATAATTCACCATCATATATTCAGAGTAAGCTTCGACTGTTTATGCAATAAAATGGAAAAGGACTTATTCCTTGATATATGTCGTTTCTTTGTTGGTAAAGGCAGAGCCTATGTTACCAAGATCCTCAATGGCTGTGGAGTAGACGCTGATAGCGGAATAAGAGTTCTCTTAGAGCGTAACCTCATAAAAGTTAAAATGAAGAACAAATTCGCAATGCATCCTTTGCTACGAAAAATGGGAATAGAAATTCTTCTTGAAACTCCAAGAAAGGAACCTGAACTGTGGTTTGATGAGGATGCGGAATATGTATTAACACATAATACACTCTTTTCATCACAGGGGACAAATCAGGAATTGTATGTGAAACTACGTTCAGCCAGAAGAGACAGATCAAGACTGCTGCAACCAGATGGATTTTCTGAGTACGTTTCTAAGAGACCGAGATGGATCAGTTTGCGAAGGTTTTCTTCAAAATACCTACCTGACTATTTTTATCTGCATGATGCGATAGCGATTGATTTAAAACACAGTCTTCTTCGATTCGTTTGGAACAAATTTCAGGTTTTGGCGTGGCTAAAATTTCTTAATCTTAGTCACTCCATGTATTTAACAGCAACCCCTGACCTTTCCGGACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCACGATTGCGCGAAGTACACCAATCTATTGGATGTCTCTGCAATCTTATACTACTAAATTTGAAGGACTGTACAAGTCTAAGCAATCTCCCAAGAGGGATGTATAAGTTGAAATCCTTAAAAACTCTCATTCTCTCTGGTTGCTCCAAGATTGACCTATTGGAGAAAGATATAGTGCAAATGGAATCCTTGATAACTTTAATTGCTGAAAATACTGCTGTGAAACAATTGCCTTTTTCAATGATAAGCTCAAAAAGCATTGGATATATATCCCTACATGAATTTGAGGGATTGTCACATAATCTTTTTCCTTCTATCATTCGGTCTTGGATGTCGCCAACAATGAATCCAGTATATTATAATCATTCTTTTTGCGTGGATATCGATAATAGTTGGGAGGATATTGCGCCATTGCTAAGTAGCCTTGAAAATCTTCGAAGTGTTTTGGTGCAATGTGACACCGAGTTTCAACTATCTGAGCAAGTTACAATTTTTCTGCTCGAACATGGTGTAAATATTACAGAATCAGGAATTTCAGAGCATCACTTTAGGTCTTGCTTGATTGGTGTTGGAAGATACAATGAATTCTTCAATACTATCAGTGATAGCATTTCTGAGGTTCTTCTCTAG 2127 0.3808 DDKSGWTNALTKVANLFGWDESNYRSDAELVDAIVKSVLNLPVLSATKFPVGLLYQVEDVIRTIKNKSTEVCTIGICGMGGSGKTTLAKAIYCEIHGTFTEKSFIEDIAEISHTRGVIYLQKQLFSDVLKTKVEIRSVEMGISTIRERLFGKRVLIVLDDVNEYGPLFDLLESRALFGKGSVIIITTENEYLLSNLQLDSVFQTNLMNTNESFQLLSWHAFREAKPKEEYRDLAARVVVYCGGQALALEVIGSGLFERTKEEWNSLLLKLEKIPPHIIHHHIFRVSFDCLCNKMEKDLFLDICRFFVGKGRAYVTKILNGCGVDADSGIRVLLERNLIKVKMKNKFAMHPLLRKMGIEILLETPRKEPELWFDEDAEYVLTHNTLFSSQGTNQELYVKLRSARRDRSRLLQPDGFSEYVSKRPRWISLRRFSSKYLPDYFYLHDAIAIDLKHSLLRFVWNKFQVLAWLKFLNLSHSMYLTATPDLSGLPSLEQLILKDCPRLREVHQSIGCLCNLILLNLKDCTSLSNLPRGMYKLKSLKTLILSGCSKIDLLEKDIVQMESLITLIAENTAVKQLPFSMISSKSIGYISLHEFEGLSHNLFPSIIRSWMSPTMNPVYYNHSFCVDIDNSWEDIAPLLSSLENLRSVLVQCDTEFQLSEQVTIFLLEHGVNITESGISEHHFRSCLIGVGRYNEFFNTISDSISEVLL* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00987 708 Gene3D - 207 290 IPR042197 -
Lapu10g00987 708 Gene3D Ribonuclease Inhibitor 422 563 IPR032675 -
Lapu10g00987 708 Gene3D - 42 201 IPR027417 -
Lapu10g00987 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 302 IPR027417 -
Lapu10g00987 708 PRINTS Disease resistance protein signature 148 162 - -
Lapu10g00987 708 PRINTS Disease resistance protein signature 73 88 - -
Lapu10g00987 708 PRINTS Disease resistance protein signature 241 255 - -
Lapu10g00987 708 PRINTS Disease resistance protein signature 534 550 - -
Lapu10g00987 708 SUPERFAMILY "Winged helix" DNA-binding domain 281 380 IPR036390 -
Lapu10g00987 708 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 577 IPR044974 GO:0006952
Lapu10g00987 708 Pfam NB-ARC domain 56 272 IPR002182 GO:0043531
Lapu10g00987 708 SUPERFAMILY L domain-like 423 612 - -
Lapu10g00987 708 Gene3D - 1 41 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00987 Lapu-Chr10 11514960 11517484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00987 1 550 WRKY Transcription Factor Family AT4G12020 28.547 6.42e-50 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00987 - - vun:114165880 855.129