Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00986 ATGGCCTCAACACTTCCTTCCATTGAATTCGCTTCTTCATCATCCCAACTCCCACGCATGTACGATGTGCTCATCAACTTCACTGGAGAAGACATCCGTAAGAAATTTGTTTCTCATCTCGATTCTGCCCTCTCATCTGTTGGGTTCTCCACTTTCCTTCACGAGGAGAATGCAGTGAACGAAATGCACATCCAACAACCTATTCTTAATCTCTGTCGGATAGTAATTGTTGTTTTTACCAAAACCTATTCTCAATCTGCTTGGTGTCTTCATCAACTTCAACAAATCATCAAATGGCACCAGACTTATTCCCGACATGTTTTGCCCGTATATTACGAAGTTGAGCCATCTGATGTACGTCTTCAGAAGGGTGACTTTGGAAAAGCCTTCAAAGCAACTGCACAACAAACATTTTCTAGAGAACAACTGCAGCATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGATACAATTGTTAAGAGCGTTCTTAATTTTCCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCGCGTGAAAGATGTGATTCTAACTATAGAAAATAAGTCCACCGAAGTTTGTAGAATAGGGATATGTGGAAAGAGAGGATCCGGTAAAACCACCATTGCCAAAGTCATCTACCATCAAATTCATGGTACATTCACGGAGAAAAGTTTCATTGAAGATATTGCACAAATTAGTCAAACAAAAGGGGTTGTTTATTTACAAGAGCAACTTCTTTCAGATGTCCTTAAAACAAAGGTGGAGATACATAGCGTTGAGATGGGAAGAAGTACGATTCGGGAAAGACTTTCTGGGAACAGAGTGCTCATTGTACTTGACGATGTGAATGAGTATGATCCATTATTTGACTCATGGGAAAATCCTGTATTGTTCGGTAAAGGAACTGTAATAATAATCACAGCAGAAAGTGAATACCAACTGAACAAACCTCGAGTTGATTTTCTTTTTCGGATAAAGCCATTGAACGAAAACGAGTCCTTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAACAAGAATACAATGACCTTGCAAGAAATGTAGTTGCTTATTGTGAAGGACTTCCTCTAGCTCTTGAAGTCACTGGAAGTAGTTTATTTGAAAGGACGAAAGAAGAATGGAATAGTCTATTGTTAAAATTAGGGGAAATTAACCTGCATATATTTGAATATCGTATATTCGGAGTAACCTTCGAATATTTATGCAATCAAATGGAAAAGGACTTATTCCTTGATATATGTCGTTTCTTTGTTGGTAAAGACAGAGCCTATGTTACGAAGATCCTAAATGACTGTGGAGTAGACGCTGATAGCGGAATAAGAGTTCTCGTGGAGCGTAGCCTCATAAAAGTTAAAATGAAGAACAAATTGGCAATACATCCTTTGCTACGACAAATGGGAATAAGATTTCTTTTTGAAATTCCAAGAAAGGGACCCGAACTGTGGTTTGAGGACGATGCGGAATATGTATTAACAGATAATGCAGTAAGAACATTATTTATATATGTAGTTTTGAAACTTCTTTCGGAAGTGTTTGCTTTCTCGTGTGCAATACATTTGTTTTTGTTAGCTCTTTTCATCACAGGGGACAAAGCAAGCTTATCTGAAACTGCGTTCAGCCAGAAGAGACAGATCAAGACTGCTGCAACCAGATGA 1755 0.3903 MASTLPSIEFASSSSQLPRMYDVLINFTGEDIRKKFVSHLDSALSSVGFSTFLHEENAVNEMHIQQPILNLCRIVIVVFTKTYSQSAWCLHQLQQIIKWHQTYSRHVLPVYYEVEPSDVRLQKGDFGKAFKATAQQTFSREQLQHGMSRWSHALTKAANFFGWDESNYRSDAELVDTIVKSVLNFPVLSATKFPVGLQSRVKDVILTIENKSTEVCRIGICGKRGSGKTTIAKVIYHQIHGTFTEKSFIEDIAQISQTKGVVYLQEQLLSDVLKTKVEIHSVEMGRSTIRERLSGNRVLIVLDDVNEYDPLFDSWENPVLFGKGTVIIITAESEYQLNKPRVDFLFRIKPLNENESFELLSWHAFREAKPKQEYNDLARNVVAYCEGLPLALEVTGSSLFERTKEEWNSLLLKLGEINLHIFEYRIFGVTFEYLCNQMEKDLFLDICRFFVGKDRAYVTKILNDCGVDADSGIRVLVERSLIKVKMKNKLAIHPLLRQMGIRFLFEIPRKGPELWFEDDAEYVLTDNAVRTLFIYVVLKLLSEVFAFSCAIHLFLLALFITGDKASLSETAFSQKRQIKTAATR* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00986 584 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Lapu10g00986 584 Pfam NB-ARC domain 208 418 IPR002182 GO:0043531
Lapu10g00986 584 SMART till_3 20 160 IPR000157 GO:0007165
Lapu10g00986 584 Pfam TIR domain 21 182 IPR000157 GO:0007165
Lapu10g00986 584 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 163 IPR035897 -
Lapu10g00986 584 Gene3D - 185 341 IPR027417 -
Lapu10g00986 584 Gene3D - 18 184 IPR035897 -
Lapu10g00986 584 Gene3D - 350 428 IPR042197 -
Lapu10g00986 584 PRINTS Disease resistance protein signature 217 232 - -
Lapu10g00986 584 PRINTS Disease resistance protein signature 292 306 - -
Lapu10g00986 584 PRINTS Disease resistance protein signature 385 399 - -
Lapu10g00986 584 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 529 IPR044974 GO:0006952
Lapu10g00986 584 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 446 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00986 Lapu-Chr10 11507633 11511667 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00986 6 561 WRKY Transcription Factor Family AT4G12020 27.352 3.03e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00986 - - vra:106773334 732.635