Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00985 ATGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACAAAATTGTTAAGACCGTCCTTAATTTATCAGTCTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCCACGTGGAAAATCTGATTGGAACTATCAAAAGTAGATCCACGAAAGTTTGTACGATAGGGATATGTGGAATGGGAGGATCTGGTAAAACCACCCTTGCCAAAGCCATCTACTATCAAATTCATGGTATAATGTTTCATTGA 300 0.4067 MSRWSHALTKAANFFGWDESNYRSDAELVDKIVKTVLNLSVLSATKFPVGLQSHVENLIGTIKSRSTKVCTIGICGMGGSGKTTLAKAIYYQIHGIMFH* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00985 99 Gene3D - 1 46 IPR035897 -
Lapu10g00985 99 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 94 IPR027417 -
Lapu10g00985 99 Pfam NB-ARC domain 52 92 IPR002182 GO:0043531
Lapu10g00985 99 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 94 IPR044974 GO:0006952
Lapu10g00985 99 Gene3D - 49 96 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00985 Lapu-Chr10 11500566 11505238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00985 3 93 WRKY Transcription Factor Family AT4G12020 33.696 3.92e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00985 - - pvu:PHAVU_010G029000g 167.162