Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00984 ATGGGAAGAAAAATGATTCGGGAAAGAATTTATGGGAAAAGGGTGCTCATTGTACTTGACGATGTGAATGACTATGGTCTATTAGACCTATGGGAAAGTACATGGTTCGGTGAAGGAACTGTAATGATCATTACAACAAGAGATAAACACCTACTGAGTAAGCGTAAAGTTGATTATTTTTTTCCGATACATGTAATGAACGCAAACGAGGCCCTTGAGCTTCTTAGTTGGCACGCATTTACAGAAGCAAAACCAAAGAAAGAATACAATGAGCTTGCAAAAGCAGTAGTTGATCATTGTGGAGGACTACCTCTAGCTCTTGAAGTCATTGGAACTTATTTATATGAAAGGACGAAACAAGAATGGAATAAAGTATTGTTAAAATTAGTGACAATTGCCCGATATGGAGTTCAAGAGATACTGAAAATAAGCTTCGACGGTTTAAATAATCAAATGGAAAAGGATTTACTCCTTGATGTATGTTATTTCTTTGTTGGTAAGAGAAGAACTTATGTTACGAAGATCCTAAATGGCTGTGGAGTAGACGCTGATAGTGGAATAAGAGTTCTCATAGCACGTAGCCTCATAATAGTTAAAAAGAACAACAAATTTGGAATGCATTCTATGCTACGAGAAATGGCAATAGAAATTTTTCGTGAAATTTCAAGAAACGAACCTGGGAAGAAAAGTAGAATGTGGTTTGAAGAGGGTAGGGAATATACTCTGTCAAAGAATACTGTAAGAACATTCTTTATCTCTGGTTTTGAAACTTCTTTTGGAAGTGCTTGCTTTCTCATGTGCAATAGATTTGTTTTTCAGCTCTTTTCATCACAGAAGACAAAAGTCATTCAGAGATTGCCTTTGAATCTGTTTTTAATCAGAACATATTGCTTCGAACCTTATCCTTTAGAGGTAAGAGACACATCAAGAATGCTGAAATTCGTTGGACACTCTGAGTACCCTTCTAAGAAACTGAGATGGATAAGTTTGCAAGGTTTTTCTTCAGAATACCTACCTAACGACTTTTATCTGCATGATGCAATAGCGATTGATTTAAAACACAGTCTTCTTCGACTCGTCTGGAAAGAACCAAAGGTTTTTATTACGTGCCGTTTTCTTTTAAAATTCATAGTTTAA 1137 0.358 MGRKMIRERIYGKRVLIVLDDVNDYGLLDLWESTWFGEGTVMIITTRDKHLLSKRKVDYFFPIHVMNANEALELLSWHAFTEAKPKKEYNELAKAVVDHCGGLPLALEVIGTYLYERTKQEWNKVLLKLVTIARYGVQEILKISFDGLNNQMEKDLLLDVCYFFVGKRRTYVTKILNGCGVDADSGIRVLIARSLIIVKKNNKFGMHSMLREMAIEIFREISRNEPGKKSRMWFEEGREYTLSKNTVRTFFISGFETSFGSACFLMCNRFVFQLFSSQKTKVIQRLPLNLFLIRTYCFEPYPLEVRDTSRMLKFVGHSEYPSKKLRWISLQGFSSEYLPNDFYLHDAIAIDLKHSLLRLVWKEPKVFITCRFLLKFIV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00984 378 Gene3D - 1 59 IPR027417 -
Lapu10g00984 378 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 360 IPR044974 GO:0006952
Lapu10g00984 378 PRINTS Disease resistance protein signature 9 23 - -
Lapu10g00984 378 PRINTS Disease resistance protein signature 100 114 - -
Lapu10g00984 378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 156 IPR027417 -
Lapu10g00984 378 Pfam NB-ARC domain 4 134 IPR002182 GO:0043531
Lapu10g00984 378 Gene3D - 65 149 IPR042197 -
Lapu10g00984 378 SUPERFAMILY "Winged helix" DNA-binding domain 137 236 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00984 Lapu-Chr10 11500566 11505238 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00984 5 361 WRKY Transcription Factor Family AT5G45050 27.520 2.30e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00984 - - vun:114165123 415.616