Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00979 ATGGAGGAAATGGACGAAAATGAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTTGGACAAGAAAAACCAAGTAAAGAACTCGATGAACTTGCAAGAGATGTAGTTGTTTATTGTGGAGGATTACCTCTAGCTCTTCGAGTCCTTGAGAGAGGCTATGTCACAGAGATACTAAATGGCTGTGGACTACATGCTGATATTGGAATAACAGTTCTCATAGAACGAAGTCTCATAAACATTGAAAGGAACAACAAAATTGGAATGCATCATTTGCTACGAGACATGGGAAGAGAGATAATTTGTGAAAGTTCAAGAAACGAACCTGGGAAGCGCAGTCGATTGTGGGTTGAAAAGGATGTGGTTGATGTATTGACAAAAAATGCTGCGACAGATGCTATTGAGGGATTGACTTTGAAAATGCATTTCAATAGTAGAGATTGCTTCGAAGCTTATGCTTTTGAGCAAATGAAGAGATTGAGACTGTTGAAACTTGATCATGTACACCTCACTGGAGACTATGGGCATCTTTCTAAGCAACTGAGATGGATCTACTGGCAAGGGTTTCCTTTAAAATACATACCTAACAACTTTTATCTGGAAGGTGTCATTGCCATGGATTTAAAACACAGTAATCTTAGGCTAGCTTGGAAAGAACTCCAGGTTTTGCATTGGCTAAAAATCCTAAATCTTAGTCATTCCAAGTACTTGACAGAAACTCCTAACTTTTCAAAACTACCAAGTCTTCAAAAACTCATTCTCAAAGATTGTCCAAGTTTGTGCAAGGTACATCAGTCCATTGGAGGTCTCCACAATCTTGTATTGATAAATTTGAAGGACTGTACAAGCCTAAGCAATCTTCCAAGAGAGATATACATGTTGAAATCTTTGAAAACTCTCATCCTATCTGGTTGTTCGAAGATTGACAAATTGGAAGAAGATATAGTACAGATGGAATCTTTGAAAACTCTGGTTGCTGAAAATACTGCAGTTAAACAAGTGCCCTTTTCAATAGTAAGCTCAAAAAGCATTGGATATATATATCCCTATGTGGATTTGAAGGAATATCTCGTAATACTTTTCCTTCTATCATTTGGTCTTGGATGTCACCAGCAATGA 1113 0.3774 MEEMDENESLELFSWHAFGQEKPSKELDELARDVVVYCGGLPLALRVLERGYVTEILNGCGLHADIGITVLIERSLINIERNNKIGMHHLLRDMGREIICESSRNEPGKRSRLWVEKDVVDVLTKNAATDAIEGLTLKMHFNSRDCFEAYAFEQMKRLRLLKLDHVHLTGDYGHLSKQLRWIYWQGFPLKYIPNNFYLEGVIAMDLKHSNLRLAWKELQVLHWLKILNLSHSKYLTETPNFSKLPSLQKLILKDCPSLCKVHQSIGGLHNLVLINLKDCTSLSNLPREIYMLKSLKTLILSGCSKIDKLEEDIVQMESLKTLVAENTAVKQVPFSIVSSKSIGYIYPYVDLKEYLVILFLLSFGLGCHQQ* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00979 370 Coils Coil 306 326 - -
Lapu10g00979 370 SUPERFAMILY "Winged helix" DNA-binding domain 53 123 IPR036390 -
Lapu10g00979 370 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 319 IPR044974 GO:0006952
Lapu10g00979 370 SUPERFAMILY L domain-like 137 342 - -
Lapu10g00979 370 Gene3D - 3 50 IPR042197 -
Lapu10g00979 370 Gene3D Ribonuclease Inhibitor 134 347 IPR032675 -
Lapu10g00979 370 PRINTS Disease resistance protein signature 38 52 - -
Lapu10g00979 370 PRINTS Disease resistance protein signature 290 306 - -
Lapu10g00979 370 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 48 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00979 Lapu-Chr10 11480897 11482477 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00979 48 336 WRKY Transcription Factor Family AT4G12020 33.443 1.03e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00979 - - gmx:100806743 520.39