Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00976 ATGTTACTCTCCAAGTCACTGAAATCTAGTTCACTCTTTGGCTTCCTTTCTGACGATTTAAAGGAGAAAAAAATTCGGAAAAAGTTAAAGAAAACCCAAAATTTCAGCCCTGTCCTTGTTCCTCGTCCTCAAAATTTTCAGCCTAGCCTTAACAGTCTCACTCTCATGCTGCGGTTTGTCGCAACTGGGTCAAACATTTCTCTGCCTTTTCGACACTCAGCAGTTTTGAAAGCTCTGCGAGTGTTTACTTCCACCACATGTTCGACCATTTGCCTCACCCAAACCAAGGTTGAAGTTGAAGATGATAACAGCAAATGGAGTGATGCTACTGAACTTTTGAGCAAATGGGGTTGCAGTGATGATGATTTGGTGAGAATATTCTCGCGCTGTCCCTCGTTGCGCAATACTGATCCCACGCAGGTTCAATCTAGACTGTGCCTGCTTAGTGATTTGGGCTTGCATGCTTCTCAACTTTTGAAGATTGTCAATTGTAGACCACGGTTTTTCCGGTCTCGGATTGACTCTTGTTTAGAAGAGAGGATGGAACATCTTACATCATTGTTTGAGTCCAAGGAAGTGCTTCAGAAGGCCATTGCAAGGAACCCTTCATTGCTGCTATCGGAAGGTCGCTGTAATGTTAAGGCCACAGTTGAGCTCTATGAGAAGTTGGGTGTTAAGAAAGGGGACTTGATTCAGATGCTGCTTTTGCGGCCCACGATTATTTCAAGGACTTCCTTTGATGCTGAGAAGCTGGAATATTTAAGCAACATTGGGCTTACTATGGATTCAAAGATGTATAAATATGTGGTAACATTAATTGGAATCTCTCGCGTGGAAACTATCCGGGAAAAGGTGGCGAATTTCGCAAAGTTTGGGTTTTCTGAAGAGGAGATATTTGGTCTTGTGGGAAGGTCTCCTAATGTTTTGACATTGTCGACAGACAAGGTTCAGAGGAACATGACTTTCATTTTGGGCACGATGAAGCTTGATGCTAAGATGGTTCTAACGCAGCCGTATCTATTGTATGCCAATGTCGATACTGTTTTGAAGCCAAGAGTTCTACTAGCATTGAAGATTCAAGATATGGATTCGAAGTTGCAAATCATAGGACCAACGATAGTACGTTTCCTTAGGATGCCAGAGAAGAGATTTTTGGACTTGTTTGTCAAATGCCATGGCAAGGATGTCGCCAATGAATTGATGGATTTCTATAAAAGGACAAAAGAGGTTAAGAGATTAGGAGAGTCATCAAAGAAGTGGAGTAAGAGAGGATTCCCTTTCTGA 1284 0.4229 MLLSKSLKSSSLFGFLSDDLKEKKIRKKLKKTQNFSPVLVPRPQNFQPSLNSLTLMLRFVATGSNISLPFRHSAVLKALRVFTSTTCSTICLTQTKVEVEDDNSKWSDATELLSKWGCSDDDLVRIFSRCPSLRNTDPTQVQSRLCLLSDLGLHASQLLKIVNCRPRFFRSRIDSCLEERMEHLTSLFESKEVLQKAIARNPSLLLSEGRCNVKATVELYEKLGVKKGDLIQMLLLRPTIISRTSFDAEKLEYLSNIGLTMDSKMYKYVVTLIGISRVETIREKVANFAKFGFSEEEIFGLVGRSPNVLTLSTDKVQRNMTFILGTMKLDAKMVLTQPYLLYANVDTVLKPRVLLALKIQDMDSKLQIIGPTIVRFLRMPEKRFLDLFVKCHGKDVANELMDFYKRTKEVKRLGESSKKWSKRGFPF* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00976 427 PANTHER CGI-12 PROTEIN-RELATED 76 392 IPR003690 GO:0003690|GO:0006355
Lapu10g00976 427 SMART mt_12 331 363 IPR003690 GO:0003690|GO:0006355
Lapu10g00976 427 SMART mt_12 124 154 IPR003690 GO:0003690|GO:0006355
Lapu10g00976 427 SMART mt_12 263 294 IPR003690 GO:0003690|GO:0006355
Lapu10g00976 427 SMART mt_12 195 226 IPR003690 GO:0003690|GO:0006355
Lapu10g00976 427 SMART mt_12 299 330 IPR003690 GO:0003690|GO:0006355
Lapu10g00976 427 SMART mt_12 159 190 IPR003690 GO:0003690|GO:0006355
Lapu10g00976 427 FunFam Mitochondrial transcription termination factor family protein 177 398 - -
Lapu10g00976 427 Pfam mTERF 83 385 IPR003690 GO:0003690|GO:0006355
Lapu10g00976 427 Gene3D Transcription termination factor 3, mitochondrial 188 398 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu10g00976 mTERF 8.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00976 K15032 - gmx:100799629 611.683