Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00974 ATGGAATTGGCGTCTTCATCATCCAAACTCCCGCGGATGTACGATGTGCTCATCAACTTCACTGGAGAAGATATCCGTAGGAAATTTGTTTCTCATCTCGATTCTGCTCTCTCTTCTGTTGGATTCTCCACTTTCCTTCACGAGGAAAATGCACTGAAGGAAACGCACCTCCAACAACCTATTCTCGATCTCTGTCGGATAGCAATTGTTGTTTTCACCGAAACCTATTCCCAATCTGCTTGGTGTCTTCATCAACTTCAACAAATCATTAAATGGCACCAAACTCATTGCCGACATGTTCTTCCCGTATATTACGAAGTTCAGCCATCTGATGTACGTCTTCAGAAGGGTGATTTTGGAAAAGCCTTCAAAGCAACTGCACAACAAACATTTTCAGGAAAACAACTGGAGCATGGCATGTCCAGGTGGAGCAACGCACTCACCAGAGCTGCAAATTTCTTTGGATGGGATGAGAGCAATTACAGGAGTGATGCTGAACTAGTGGACAAAATTGTTTGGAGCATTCTTAATTTACCAGTTTTGTCTGCTACTAAATTTCCAGTTGGATTACAATCCTACGTGGAAGATGTGATTCGAACCATCAAAAAGAAATCCACGGAAGTTTGTACGATATGGATACGTGGAATGGGAGGATCTGGTAAAACCACCCTTGCCAAAGCCATATACCATCAAATTCATGGTACATTCGCGGAGAAAAGTTTCGTTGAAGATATTGCACAAATTAGTCATACAAGAGGGGTTATTTATTTACAAGAACAACTTTTTTCAGATGTCCTAAAAACAAAGGTGGAGATACGTAGCGTTGAGATGGGAATAAGTACGATTCGGGAAAGACTTTCTGGGAAAAGGGTGCTCATTGTACTTGACGACGTAAATGAGTATGGTCCATTATTTGACCTATTGGACAGTCGTGCATTGTTCGGTAAAGGAACTGTAATAATAATCACATCGGAAAATGAATACCTACTTAGCAAACGTCAACTTGACGCTGTTTTTCGGATAAATCGAATGGACACAAACCAGTCACTTGAGCTTCTTAGTTGGCACGCATTTAGAGAAGCAAAACCAAAAGAAGAATACAAAGATCTTGCAGCAAGAGTGGTTGCTTATTGTGGAGGACTAGCTCTAGGTCTTGAAGTCATTGGAAGTAGTTTATTTGAAAGGACGAAAGAAGAATGGAATAGTGTATTGTTAAAATTAGAGAAAACTCCCCCGCATATATTTCACCATCATATATTCAGAGTAAGCTTCGACTGTTTATTCAATCAAATGGAAAAGGACTTATTCCTTGATATATGTCGTTTCTTTGTTGGTAAAGGAAGAGCCTATGTTACGAAGATCCTAAATGGCTGTGGAGTAGACCCTGATAGCGGAATAAGAGTTCTCGTAGAGCGTAGCCTCATAAAAGTTAAAATGAAAAACAACAAATTTGGGATGCATCCTTTGCTACAAGAAATGGGAAGAGAAATTATTCGTGAAATTTCAAGAATGGAACCTGGAAAGAACAGTCGACTGTGGTTTGATAACGATGCAGAATATGTACTGTCAGAGAATCCTCTCTTTTCATCACAGGGGACAAAAGTCATTCAGAGATTGCCTGTGAAACAGTTTAAAACCACAAGAGATTGCTCGGAACCTTATCCTTTTAAGGTAAGAAACAGATCAAGACTGCTGAAAGTCGCTGGAAATTATGAGTACCTTTCTAAGAAACTGAGATGGATCAGTTTGCAAGGGTTTTCTTCACCATACCTACCTAACGACTTTAATCTGCAAGGTGCAATAGCGATTGATTTAAAACACAGTCTTCTTCAACTCGTCTGGAAAGAACCCCAGGTTTTGGCGTGGCTAAAAGTCCTTAATCTTAGTCACTCCATGCACTTGACAGAAACCCCTGACTTTTCGGCACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAAGATTGTGCGAATTACACCAATCTATTGGATGTCTCTGCAATCTTATACTGCTAAATTTGAAGGACTGTACTAGTCTTAGCAATCTCCCCACAGAGATATACAGGTTGAAATGTTTAAAAACTCTCATTCTCTCTGGTTGTTCGATGATTGACCTATTGGAAGAAGATATAGTACAAATGGAATCCCTGATAACTCTAATTACTGAAAATACAGTTGTCAAACAAGTGCCTTTTTCAATTGCAAGCTCAAAAAGCATTGGATATGTATCCCTACCTGGATTTGAGGGATTGTCACATCATCTTTTTCCTTCTATCATTCTGTCTCGGATTTCGCCAACAATGAATCCCCTATCTTATATCCCTTCGTTTTTCATGGATATGGAAGTTAATAATTGGGATAATATTGCACCATTTCTTGGCAGCGTTGCAAATCTTCGAAGTGTTTTGCTGCAATGTGACACAGAATTTCAACTAGCTGAGCAAGTAAAAACTATACTGGGCGAATATGGTGTAAATATTACAGAATCAGGAATTTCAAAGTATCACTTCAGGTCTTCTTTCATTGGTGTTGGAAGATACAAAGAATTCTTCAATACTGTCAGCGATAGCAGACCTGAGGTATTGGCGAGCAGTGAGTCATGTGATGTTTGTCTCCCAGGTGATAATGATCCTTATTGGTTGGCCCATACGGGTGAGGGACATTCTGTTTCTTTCACTGTGCCTGGAGATCGTGACATGAAGGGAATGGCTTTGTGTGTAGTTTATTTGTCAAGCCCTGAAATCGTGGCAACTGAATGTCTTACAAGTGTCTTAGTTGTTAATTACACAAAGTGCACATTACAAATACACAAGCATGGCTCAGTTATTTCCTTTAATGATGAAGATTGGCAGTGTGTAACATCAAATTTAGGATCAGGAGACAAGGTGGAGGTTTTTGTGACATTTGGTGATGGATTGGTGGTAAAGAACACAGCTGTCTATCTGATATATGGTGAATCAAATGACTTGGAAAAAGAGCCTGCCAAAGAAAAATTCCCTCATTAG 3009 0.3961 MELASSSSKLPRMYDVLINFTGEDIRRKFVSHLDSALSSVGFSTFLHEENALKETHLQQPILDLCRIAIVVFTETYSQSAWCLHQLQQIIKWHQTHCRHVLPVYYEVQPSDVRLQKGDFGKAFKATAQQTFSGKQLEHGMSRWSNALTRAANFFGWDESNYRSDAELVDKIVWSILNLPVLSATKFPVGLQSYVEDVIRTIKKKSTEVCTIWIRGMGGSGKTTLAKAIYHQIHGTFAEKSFVEDIAQISHTRGVIYLQEQLFSDVLKTKVEIRSVEMGISTIRERLSGKRVLIVLDDVNEYGPLFDLLDSRALFGKGTVIIITSENEYLLSKRQLDAVFRINRMDTNQSLELLSWHAFREAKPKEEYKDLAARVVAYCGGLALGLEVIGSSLFERTKEEWNSVLLKLEKTPPHIFHHHIFRVSFDCLFNQMEKDLFLDICRFFVGKGRAYVTKILNGCGVDPDSGIRVLVERSLIKVKMKNNKFGMHPLLQEMGREIIREISRMEPGKNSRLWFDNDAEYVLSENPLFSSQGTKVIQRLPVKQFKTTRDCSEPYPFKVRNRSRLLKVAGNYEYLSKKLRWISLQGFSSPYLPNDFNLQGAIAIDLKHSLLQLVWKEPQVLAWLKVLNLSHSMHLTETPDFSALPSLEQLILKDCPRLCELHQSIGCLCNLILLNLKDCTSLSNLPTEIYRLKCLKTLILSGCSMIDLLEEDIVQMESLITLITENTVVKQVPFSIASSKSIGYVSLPGFEGLSHHLFPSIILSRISPTMNPLSYIPSFFMDMEVNNWDNIAPFLGSVANLRSVLLQCDTEFQLAEQVKTILGEYGVNITESGISKYHFRSSFIGVGRYKEFFNTVSDSRPEVLASSESCDVCLPGDNDPYWLAHTGEGHSVSFTVPGDRDMKGMALCVVYLSSPEIVATECLTSVLVVNYTKCTLQIHKHGSVISFNDEDWQCVTSNLGSGDKVEVFVTFGDGLVVKNTAVYLIYGESNDLEKEPAKEKFPH* 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00974 1002 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 724 IPR044974 GO:0006952
Lapu10g00974 1002 Pfam TIR domain 14 175 IPR000157 GO:0007165
Lapu10g00974 1002 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 439 IPR027417 -
Lapu10g00974 1002 SUPERFAMILY "Winged helix" DNA-binding domain 418 519 IPR036390 -
Lapu10g00974 1002 Gene3D Ribonuclease Inhibitor 560 821 IPR032675 -
Lapu10g00974 1002 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Lapu10g00974 1002 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Lapu10g00974 1002 PRINTS Disease resistance protein signature 378 392 - -
Lapu10g00974 1002 PRINTS Disease resistance protein signature 210 225 - -
Lapu10g00974 1002 PRINTS Disease resistance protein signature 689 705 - -
Lapu10g00974 1002 PRINTS Disease resistance protein signature 285 299 - -
Lapu10g00974 1002 Gene3D - 344 427 IPR042197 -
Lapu10g00974 1002 SMART till_3 13 153 IPR000157 GO:0007165
Lapu10g00974 1002 Pfam NB-ARC domain 193 410 IPR002182 GO:0043531
Lapu10g00974 1002 Gene3D - 180 337 IPR027417 -
Lapu10g00974 1002 SUPERFAMILY L domain-like 572 805 - -
Lapu10g00974 1002 Gene3D - 11 179 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00974 Lapu-Chr10 11452166 11457876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00974 14 735 WRKY Transcription Factor Family AT4G12020 29.545 1.81e-70 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00974 - - vun:114165123 1328.92