Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00973 TTTGGAAAAGCCTTCAAAGCAACTGCACAACAAACATTTTCAGCTCAACAACTGGAGCATGGCATGTCCAGGTGGAGCCACGCACTCACCAAAGCTGCAAATTTCTTTGGATGGGACGAGAGCAATTACAGGAGTGACGCTGAACTAGTGGACGAAATTGTTAAGAACGTTCTAAATTTACCACTCTTGTCTGCTGCTAAATTTCCAGTTGGATTACAAGCCCACGTGGAAGATGTGATTCGAACTATAAAAAATAATTCCGCGGATGTTTGTACGATAGGGATATGTGGAAAGGGAGGATCGGGTAAAACCACCATTGCCAAAGCCATCTACCATCAAATTCATGGTACATTCATGGAGAAAAGTTTCATAGAAGATATTGCACAAGTTAGTCGGACAAGAGGGCATATTCCTTTACAAGAACAACTTCTTTCAGAGGTCCTAAAAACAAAGGTGGAGATACGTAGTGTTGAGATGGGAAGAAGTATGATTCGGAAAAGACTTTCTGGGAAGAGGGTGCTA 522 0.4215 FGKAFKATAQQTFSAQQLEHGMSRWSHALTKAANFFGWDESNYRSDAELVDEIVKNVLNLPLLSAAKFPVGLQAHVEDVIRTIKNNSADVCTIGICGKGGSGKTTIAKAIYHQIHGTFMEKSFIEDIAQVSRTRGHIPLQEQLLSEVLKTKVEIRSVEMGRSMIRKRLSGKRVL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00973 174 Gene3D - 57 174 IPR027417 -
Lapu10g00973 174 Pfam NB-ARC domain 73 174 IPR002182 GO:0043531
Lapu10g00973 174 Gene3D - 1 56 IPR035897 -
Lapu10g00973 174 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 174 IPR027417 -
Lapu10g00973 174 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 174 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00973 Lapu-Chr10 11447973 11448586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00973 18 174 WRKY Transcription Factor Family AT4G12020 33.962 1.60e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00973 - - pvu:PHAVU_010G029000g 279.256