Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00971 ATGCTGAAATTCGCTGGACACTCTGAGTACCCTTCTAAGAAACTGAGATGGATAAGTTTGCAAGGTCTTTCTTCAGAATACCTACCTAACGACTTTTATCTGCATGATGCAATAGCGATTGATTTAAAACACAGTCTTCTTCGAATCGTCTGGAAAGAACCACAGGTTTTGGCAGGGCTAAAAGTTCTTAATCTTAGTCACTCGAAGTACTTAACAAAAACCCCTGACCTTTCGACACTACCAAGTCTTGAACACCTCATTCTCAAAGATTGCCCAAGTTTGCGTGAAGTACACCAATCTATTGGAAGTCTCAGCAATCTTATACTGCTGAATTTGAAGGACTGTACAAGTCTAAGCAATCTCCCCAGAGAGATATATAAGTTGAAATCTTTAAAAACTCTCATTCTCTCTGGTTGTTCCAAGATTGACCTATTGGAAAAAGATATAGTTCAAATGGAATCCTTGATAGCTCTAATTACTGAAAATACAGCTGTGAAACAAGTCCCTTTTTCAATTGTAAGCTCAAAAAGCATTGGATATATATCCCTACGTGGATTTGAGGGATTGTCACTTCGTCCTTTTCCTTCTATCATTCGGTCTTGGATGTCGCGAACAATGAATCACCTATCTTCTATTCATTCGTTCTTCATGGATATGGAGGATAATAGTTGGTATGATATTGCACCCTTTCTTAGCAGCCTTGCAAATCTTCGAAGTGTTTTGGTGCAATGTGACCGCGATTTTCCACTATCTAAGCAAGTAAAAACTATACTGGTCGAATATGGTACTATTACAGAATCAGGAATTCCACAGCATCACTTCAGGTCTTCTTTGATTGGTTTTGGAAGATACAATACTGTCAGCGATAGCATATCTGAGGTACTGGAAATCAGTGAGCCTTGTGATGTTTGTCTCCCAGGTGACAATGATCCATATTGGTTGGCCCATATGGGTGAGGGATATTCCGTTTCTTTCACTGTGCCTGGAGATCGTGACATGAAGGGAATGGCTTTATGTGTTGTTTATTTATCAACCCCTGAAATCATTGAACCTGAATTTACTACTGTCTTAATCGTTAATTACACAAAGTGCACATGCCAGATACACAAGCATGGCACAGTAATTTCCTTTACTGATGAAGATTGGCATTGCATAATGTCAAATTTAGGATATGGAGATAAGGTGGAGATTTTTGTGACCTTTGGTGATGGATTGGTGGTTAAGAACACAACTGTCTATCTGATATATGAGAAATCAAATGACTTGGAAAAAAAGCCAAAGAAGAATTCCCTCGTTAGATTCATAAAAAAAATTAGGTGA 1320 0.3841 MLKFAGHSEYPSKKLRWISLQGLSSEYLPNDFYLHDAIAIDLKHSLLRIVWKEPQVLAGLKVLNLSHSKYLTKTPDLSTLPSLEHLILKDCPSLREVHQSIGSLSNLILLNLKDCTSLSNLPREIYKLKSLKTLILSGCSKIDLLEKDIVQMESLIALITENTAVKQVPFSIVSSKSIGYISLRGFEGLSLRPFPSIIRSWMSRTMNHLSSIHSFFMDMEDNSWYDIAPFLSSLANLRSVLVQCDRDFPLSKQVKTILVEYGTITESGIPQHHFRSSLIGFGRYNTVSDSISEVLEISEPCDVCLPGDNDPYWLAHMGEGYSVSFTVPGDRDMKGMALCVVYLSTPEIIEPEFTTVLIVNYTKCTCQIHKHGTVISFTDEDWHCIMSNLGYGDKVEIFVTFGDGLVVKNTTVYLIYEKSNDLEKKPKKNSLVRFIKKIR* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00971 439 Gene3D Ribonuclease Inhibitor 7 266 IPR032675 -
Lapu10g00971 439 SUPERFAMILY L domain-like 13 238 - -
Lapu10g00971 439 Coils Coil 142 162 - -
Lapu10g00971 439 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 44 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00971 Lapu-Chr10 11437804 11442629 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00971 9 250 WRKY Transcription Factor Family AT4G12020 30.882 6.72e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00971 - - pvu:PHAVU_010G025300g 605.52