Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00967 ATGGAGTTCGCTTCTTCTTCATCTTCATCCTTCTTAAACTCAGAACCCCAGTTCAGATACGATGTCTTCATCAACTTTTGGGGAGAAGACATCCGTAGAAAGTTCGTTTCTCATCTCCATTCAGTCCTTTTACAAGCTCAAGTCAAGACTTTAATTAACGAGGAGGATCTGCAAGAGGGAATGAAGCTAGAAGAACACATGGGAGAAATAGCAGCCTCTAAGATTGCAATAATCGTTTTCTCCAAAACATACACTCAATCTGCCTGCTGTCTTCTTGAGCTTGAAAAAATCATTGAATGCCACGAAACTTTTGGCCAAATAGTTCTGCCCGTATTTTACGATATTGACCTATTCGATGTACGTCATCCGAAGGATGATTTTGGAAAAGCGTTGGAAGAAGCTGCACAGAGAAGCTATTCAGGAGAACAACTGGAAGATGCATTGTCCAGGTGGAGCCGTGCACTCACCAAAGCTGCAGCTATCACTGGTTCGGATGTCAGAGATTTCAGGCATGATGCTGAACTTGTGGAGGTAACTGTTAGCCGCGTTCAGACATTACTGGACTATGAAGACTTGTCCATTACCCAGTTTCCCGTTGGATTAGCCTCCCACGTGGAAAAGATGATTGGATGTATTGAAAATCAATCCACCAAAGTCTGTATGATAGGGATATGGGGAATGGGAGGATCGGGTAAAACCACCCTAGCCAAAGCCATCTATAATCGAATTTCTCGTCCATTCATCGGTAAGAGTTTTTGTGAAAATATTAGAGAAGTTTGGGATCGAGGAAATAGAAGTTATGTTCAATTGCTAGAAAATTTTCTTTATAATGTCCTAAAATCGAAGTTCAAGGTGGAAAGCGTTGCTAAGGGGAGAATTGTGATCGAGAAAGAACTTTCTCGAAAAAAGTTGCTCATTGTGCTTGATGATGTGAATGAATTTGGTCAATTAGAAAACTTATGCGGGAATCGTGAATGGTTCGGTCAAGGAACTGTGATAATCGTTACAACTAGAGATGTTCACGTGCTGAACCGACTCAAAGTTAATTATGTTTATAAAATGGATGATATGAACGATTGTGATTCCCTTCAGCTTTTAAGTTGGCATGCCTTTAGACATGCAAACCCAACAGAAGACTTCAATAATCTTGCAAAAAGCATAGTTGCTTATTGTGGAGGACTGCCACTAGCTCTTGTGGTCCTTGGTTCCTATTTATGTTATCGGACAAAGGAAGAGTGGAAAAGTGTACTTACAAAACTTAAAAGATTTCCCAATGAGAACGTTGAAGACAAATTGAGAATAAGTTTTGACGGTTTATGCGATGACATGGAAAAGGATATATTTCTTGACGTATGTTGTTTCTTTATTGGTAAAGAGAGAGGCTATGTCACGGAGATACTAAATGGATGTGGACTATTTGCTGATATTGGAATAACAGTTCTGATAGAACGTGGCCTAATAAAAGTTGAAAGGAACAACAAACTTGGAATGCATCCTTTGTTACGAGACATGGGAAGAGGAATTATTCGTGAAAGATCGCCAAAGGAACCGGGGGAAAGGAGTCGACTATCGTTTCGTGGTGATGTAGAAGATGTTCTGGATATGAATACTGGAACCAAAGCTACCCTGGGATTGTCCCTGAAACTGCATTCAACCAACAGAGATTGCTTGGCAGCTCGTGCTTTCAAGGAAATGAAGAGATTAAGACTGCTACAACTGGATCATGTACAACTTACTGGAGATTATGGGTATCTTTCTAAACAACTGAGATGGATTTGTTGGCGAGGGTTTCCTTCTAAATACATACCAGACAACTTTCATATGGAAAATGTAATTGCAATTGATTTTAAACATAGTCATCTTCAATTCGTCTGGAAACAACCCAAGGTTTTAGGGTGCCTAAAATTCCTTAATCTTAGTCACTCCAAGTTCTTGAGAGAAACACCTGACTTTTCAGGATTACCGAGTCTTCAACAGCTCATTTTGAAAGATTGCCCAAGTTTGTGCAAGGTACACCCATCCATTGGAGATCTCTGCAATCTACAACTCGTAAATTTGAAGGACTGCACAAGTCTAAGCAATCTCCCCAGAGAGGTATATAAGTTGAAATCTTTAAGAACTTTCATCCTCTCTGGTTGTTTGAAGATTGAAATATTGGAAGAAGGTATAGTGCAGATGGAATCCTTGATAACTCTAGTTACTGAAAATATAGCTGTGAAACAAGTGCCCTGTTCAATTGTAAGCTCAAAAAGCACTGGATATATGTCCCGACGTGGATTTGAAGGATTGTCACATAATATTTTTCCTTCTATCATTCGGTCTTGGATGTCTCCAAAAATGAATCCCGAATCTTATATGGAGAGTAATAATTGGTGGGACATTGCGCCATTCCATAACGGCCTTGCAAATCTTCGAAGTGTTTTGGTTCAATGTGAGACGGAGTTTCAACTATCTAAGCAAGTAAAAACAATTCTTGCCGAATACGGTGTAAATTTTACAGAATCAAGAATTTCAAAGCATCAATTGAGTTTTTCTTTGATTGGTGTTGGAAGTTGCAATGAATTGTTCAACACTCTCAGCGATAGTGTTTCTGAGGGATTGGCAAGCAGTGAGTGTTGTGATGTTTGTCTTCCAGGTGACAACCATCCATATTGGTTGGCCCATATGAGTGAGGGACATTCAGTTTATTTCACTGTGCCTCAGGATATCGACATGAAGGGAATGGCTTTGTGTGTTGTTTATTTATCTACCCCTGAAATCGTGGCAGCTGAATGTCTTACGAGTGTCTTAATTGTTAATTACACAAAATGCACATTGCAGATACACAAGCATGACACAGTAATTTTCTTTAATAATGAAGATTGGCATGGCATAGTGTCAAATTTAGGATATGGAGACAAGGTGGAGATTTTTCTGACATTTGGTGATGGATTGGTGGTCAAGAACACAGCTGTGTATCTGATATATGGTGAATCAAATGACTTGGAAATGGAGCCCGAGCCAAAGGAAAATGCCCTCTTTAATTTCGTTAACAAAATGATAATGTGTGACTTCTGTAGGTGA 3063 0.395 MEFASSSSSSFLNSEPQFRYDVFINFWGEDIRRKFVSHLHSVLLQAQVKTLINEEDLQEGMKLEEHMGEIAASKIAIIVFSKTYTQSACCLLELEKIIECHETFGQIVLPVFYDIDLFDVRHPKDDFGKALEEAAQRSYSGEQLEDALSRWSRALTKAAAITGSDVRDFRHDAELVEVTVSRVQTLLDYEDLSITQFPVGLASHVEKMIGCIENQSTKVCMIGIWGMGGSGKTTLAKAIYNRISRPFIGKSFCENIREVWDRGNRSYVQLLENFLYNVLKSKFKVESVAKGRIVIEKELSRKKLLIVLDDVNEFGQLENLCGNREWFGQGTVIIVTTRDVHVLNRLKVNYVYKMDDMNDCDSLQLLSWHAFRHANPTEDFNNLAKSIVAYCGGLPLALVVLGSYLCYRTKEEWKSVLTKLKRFPNENVEDKLRISFDGLCDDMEKDIFLDVCCFFIGKERGYVTEILNGCGLFADIGITVLIERGLIKVERNNKLGMHPLLRDMGRGIIRERSPKEPGERSRLSFRGDVEDVLDMNTGTKATLGLSLKLHSTNRDCLAARAFKEMKRLRLLQLDHVQLTGDYGYLSKQLRWICWRGFPSKYIPDNFHMENVIAIDFKHSHLQFVWKQPKVLGCLKFLNLSHSKFLRETPDFSGLPSLQQLILKDCPSLCKVHPSIGDLCNLQLVNLKDCTSLSNLPREVYKLKSLRTFILSGCLKIEILEEGIVQMESLITLVTENIAVKQVPCSIVSSKSTGYMSRRGFEGLSHNIFPSIIRSWMSPKMNPESYMESNNWWDIAPFHNGLANLRSVLVQCETEFQLSKQVKTILAEYGVNFTESRISKHQLSFSLIGVGSCNELFNTLSDSVSEGLASSECCDVCLPGDNHPYWLAHMSEGHSVYFTVPQDIDMKGMALCVVYLSTPEIVAAECLTSVLIVNYTKCTLQIHKHDTVIFFNNEDWHGIVSNLGYGDKVEIFLTFGDGLVVKNTAVYLIYGESNDLEMEPEPKENALFNFVNKMIMCDFCR* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00967 1020 Pfam NB-ARC domain 203 430 IPR002182 GO:0043531
Lapu10g00967 1020 ProSiteProfiles TIR domain profile. 18 187 IPR000157 GO:0007165
Lapu10g00967 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 450 IPR027417 -
Lapu10g00967 1020 PRINTS Disease resistance protein signature 652 668 - -
Lapu10g00967 1020 PRINTS Disease resistance protein signature 298 312 - -
Lapu10g00967 1020 PRINTS Disease resistance protein signature 221 236 - -
Lapu10g00967 1020 PRINTS Disease resistance protein signature 391 405 - -
Lapu10g00967 1020 SUPERFAMILY "Winged helix" DNA-binding domain 428 513 IPR036390 -
Lapu10g00967 1020 Gene3D Ribonuclease Inhibitor 538 744 IPR032675 -
Lapu10g00967 1020 Gene3D - 356 440 IPR042197 -
Lapu10g00967 1020 Gene3D - 190 351 IPR027417 -
Lapu10g00967 1020 SUPERFAMILY L domain-like 546 806 - -
Lapu10g00967 1020 Gene3D - 13 189 IPR035897 -
Lapu10g00967 1020 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 740 IPR044974 GO:0006952
Lapu10g00967 1020 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 162 IPR035897 -
Lapu10g00967 1020 Pfam TIR domain 20 178 IPR000157 GO:0007165
Lapu10g00967 1020 SMART till_3 19 161 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00967 Lapu-Chr10 11421480 11426804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00967 13 746 WRKY Transcription Factor Family AT4G12020 28.252 1.23e-67 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00967 - - pvu:PHAVU_010G027900g 1446.8