Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00964 ATGGAATGTGTGGTTTCTGCTGCTTCTTCGTCATCAAAATCCAAAACCCATTGGAGATACGATGTGTTTCTGAACTTCAGAGGAGGAGACACTCGTAGCACCTTCGTGTCTCATCTCCACAGTGCCCTCTCAAACGCGGGAGTCCACACTTTCATCGATGTGGGACTTGAGAAGGGGCAGAACCTGGGACCAGAACTACTGCGAGCGATTGAAGGCTCTCAGATAGCAATAGTTGTTTTCTCCAAAAACTACACTGAATCAGGTTGGTGCCTTGACGAGTTGGCAAAAATTGCAGAGTGTCACAGAAGTCATGGGCAGGTGGTGGTGCCCATATTTTACGACGTTGATCCATCGGTTGTGCGTAGACAAACGGGAGGTTTTGGAAAAGCCATGGAAGCTGTGGCCGTGAGGACATTCCCGAGCAAGATGTTGCTAGATTCATTGGTGAGGTGGAGCGATGCACTCTACCAGGTTGCAAATTTTACTGGTTGGGATATGAGGCAGTGCAGGGATGAAGCTGAACAAGTGAAGAAAATTGTGAAGGGGGTTTTGGCAGAGCTAGACAACACATTATTATCTATTACCCAGTTTCCAGTTGGCTTAGAATCTCGAGTGAAACAAGTGATTAGGTTTATTGAAAATCAATCAAGCAAAGTTTGCAAAATAGGGATCTGGGGGATGGGAGGATCAGGTAAAACAACAACTGCGAAATCCATCTACAATCAAATTCGTCGTAAATATGACCATAGAAGTTTCATTGAGAATGTTAGACAAGTATGTGAACAAGATAGTGGAGGGTATATTCATTTGCAAAAACAACTTCTTTTAGATGTTCTAAAAACAGAAGTAAAGGTACATACTACAGCAGCAGGGACCACTTTGATTCAGGAAAGACTTCGTGGAAAAAGCTCACTCATTGTGCTTGATGATGTGACTAAGATTGAGCAACTGCATGCCCTATGTGGAAATCGTAAATGGATAAGCTCAGGAAGTGTGTTCATTGTTACGTCTAGAGACATACGATTACTTACTTTACTTGAAGTTGATTACATTTATAAAGTGGAGGAAATGAATGAAAATGAGTCTCTTGAGCTTTTTAGTTTGCATGCTTTTAGGGAAGTAACTCCGACACAAGACTTCATTGAGCTCTCAAGAAATGTAGTTTCTTATTGTGGAGGACTGCCACTAGCTCTTGAAGTCCTTGGATCTTACTTGCACAAGAGAACCAAACAAGAGTGGAAAAGTGTGTTATCAAAGCTAAGAATAATTCCCAATGATCAAGTTCAGGAGAAATTGAGAATAAGCTTTTATGGTTTACAGGATCAAATGGAAAGGGATATATTTCTTGACATTTGTTGTTTCTTTATCGGAAAAGAGAGAGGCTATGTTACGGAGATACTGAATGGCTGTGGACTGCATGCTGATATTGGAATAACAGTTCTTATAGAACGTAGTCTCGTGAAGGTTGAAGAGAATAATAAACTTGGAATGCATGATTTGGTACGAGACATGGGAAGAGAGATTATTCGTCACAGTTCACCAAATCATCCTGGGAAGCGCAGTAGATTGTGGTTTCACGAGGAGGTGTTTGATGTATTGACAAATAATACTGGGACAGAAGCCATTGAGGGATTGGCATTGGAATTGCATGGAACTAGTAGAGATTGCTTTGAAGCAAATGTTTTTAAGGAAATGAAGAGATTGAAACTGTTGAAACTTGATTCTGTACAACTCAATGGATCTTTTGGGTATCTTTCTAAGCAGCTGAGATGGGTATGTTGGCAAGGATTTCCTTTGAAATACATACCTGAAAACTTTTATCAAGGAAGTGTAGTTGCCATAAACTTAAAACACAGCCATCTTAAACTAGTCTGGAAGGAACCTCAGTTGCTGGAGTGGCTAAAAATCCTCAATCTTAGTCATTCCAAAAACTTGACCACCACCCCAGACTTTTCTAAACTACCTAATCTTGAAAAGCTCATTCTCAAAGATTGCCCTCGTTTGTGCAAGCTACACCAGTCCATTGGAGATCTTTGCAAACTTCTGCTGATAAATTTGAAGGACTGTACAAGTCTTAGCAATCTGCCAAGGAGAACCTATAAGTTGAAATCTGTGAAAACTCTAATCCTTTCTGGCTGTTTGAAGATGGACAAGTTGGATGAAGACATAGTGCAGATGGAATCTTTGACAACTTTAATTGCAGAAAATATTGCTGTGAAACAAGTTCCCTTTTCGATAGTAAGATCAAAAAGCATTGGATATATATCTCTGTGTGGACATAAAGGATTATCGCGTAATGTTTTTCCATCTATCATTTGGTCTTGGATGTCACCAAAAATAAATCCCCTATCTGGTATTTACCCATGTTTGAGCATGGCATCGTCTCTGACCTCCATAGATGTGCAGAGTAACAATTTGGGTGATCTATCAAAAACGGTTAGAAGCCTTTCAAAACTTCGTAGTGTTTTGTTGCATTGTGACACGGAGTTTCAACTATCTAAAGAATTAAGAACAATTTTGGATGATGTATATGATGTAAGATCTATTAAATTAGAAACAATGTCGAATACATCAGAAATAGCAAAGCATTCCTTGAGGCCTTATTTGATTGGAATAGGAAGTTGCCATGAAGTCTTCAATACTCTCAACAAGAGCATATCAGAGGGATTGACTACCAATGAATCTTGTGATGTTTTTCTCCCGAGTGATAACCGTCCATTTTGGTTGACTCATACAGGTGAAGGACATTCAGTGTTCTTCAAAGTGCCTGAGGATCATAGTTGTCGCATGAAGGGAATGTTTCTGTGTGTTGTTTATTCATCACCCCCTGAAAAACTGGCAAAGAAATGCCTTCTTAGTGTCTTGATAGTTAATTACACAAAGTGCACCATCCAAATATACAAGCGAGACACAGTAACTTCCTTCAATGAAGAAGATTGGAAGGACATGATATCACAGCTAGGATTTGGAGACCAAGTTGAGATTTTCGTAACTTTTGGGCATGGATTGGTTGTCATGAAGATGGCTATCTATCTATTATATACTGAATCAACTAACATGCAAATGAATCCTTCTCTGGAACCAAAGGAAAATGCCCTCCTTAGATTCATAAAGAGAATTGTAATGTGTGACTTCTGGTAA 3141 0.3957 MECVVSAASSSSKSKTHWRYDVFLNFRGGDTRSTFVSHLHSALSNAGVHTFIDVGLEKGQNLGPELLRAIEGSQIAIVVFSKNYTESGWCLDELAKIAECHRSHGQVVVPIFYDVDPSVVRRQTGGFGKAMEAVAVRTFPSKMLLDSLVRWSDALYQVANFTGWDMRQCRDEAEQVKKIVKGVLAELDNTLLSITQFPVGLESRVKQVIRFIENQSSKVCKIGIWGMGGSGKTTTAKSIYNQIRRKYDHRSFIENVRQVCEQDSGGYIHLQKQLLLDVLKTEVKVHTTAAGTTLIQERLRGKSSLIVLDDVTKIEQLHALCGNRKWISSGSVFIVTSRDIRLLTLLEVDYIYKVEEMNENESLELFSLHAFREVTPTQDFIELSRNVVSYCGGLPLALEVLGSYLHKRTKQEWKSVLSKLRIIPNDQVQEKLRISFYGLQDQMERDIFLDICCFFIGKERGYVTEILNGCGLHADIGITVLIERSLVKVEENNKLGMHDLVRDMGREIIRHSSPNHPGKRSRLWFHEEVFDVLTNNTGTEAIEGLALELHGTSRDCFEANVFKEMKRLKLLKLDSVQLNGSFGYLSKQLRWVCWQGFPLKYIPENFYQGSVVAINLKHSHLKLVWKEPQLLEWLKILNLSHSKNLTTTPDFSKLPNLEKLILKDCPRLCKLHQSIGDLCKLLLINLKDCTSLSNLPRRTYKLKSVKTLILSGCLKMDKLDEDIVQMESLTTLIAENIAVKQVPFSIVRSKSIGYISLCGHKGLSRNVFPSIIWSWMSPKINPLSGIYPCLSMASSLTSIDVQSNNLGDLSKTVRSLSKLRSVLLHCDTEFQLSKELRTILDDVYDVRSIKLETMSNTSEIAKHSLRPYLIGIGSCHEVFNTLNKSISEGLTTNESCDVFLPSDNRPFWLTHTGEGHSVFFKVPEDHSCRMKGMFLCVVYSSPPEKLAKKCLLSVLIVNYTKCTIQIYKRDTVTSFNEEDWKDMISQLGFGDQVEIFVTFGHGLVVMKMAIYLLYTESTNMQMNPSLEPKENALLRFIKRIVMCDFW* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00964 1046 PRINTS Disease resistance protein signature 298 312 - -
Lapu10g00964 1046 PRINTS Disease resistance protein signature 629 645 - -
Lapu10g00964 1046 PRINTS Disease resistance protein signature 221 236 - -
Lapu10g00964 1046 PRINTS Disease resistance protein signature 391 405 - -
Lapu10g00964 1046 Gene3D - 16 188 IPR035897 -
Lapu10g00964 1046 ProSiteProfiles TIR domain profile. 18 187 IPR000157 GO:0007165
Lapu10g00964 1046 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 767 IPR044974 GO:0006952
Lapu10g00964 1046 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 164 IPR035897 -
Lapu10g00964 1046 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 189 - -
Lapu10g00964 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 451 IPR027417 -
Lapu10g00964 1046 Gene3D - 189 350 IPR027417 -
Lapu10g00964 1046 Pfam TIR domain 20 193 IPR000157 GO:0007165
Lapu10g00964 1046 SUPERFAMILY L domain-like 497 826 - -
Lapu10g00964 1046 Gene3D Ribonuclease Inhibitor 555 876 IPR032675 -
Lapu10g00964 1046 SMART till_3 19 161 IPR000157 GO:0007165
Lapu10g00964 1046 Gene3D - 356 440 IPR042197 -
Lapu10g00964 1046 Pfam NB-ARC domain 203 421 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00964 Lapu-Chr10 11401177 11407144 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00964 20 746 WRKY Transcription Factor Family AT4G12020 29.491 2.86e-79 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00964 - - vra:106773334 1541.94