Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00959 ATGAGCGACCGCGAAAGCGCCTCCGATCGATCGCTTAATTTCGACGACGTGGCAGTGGTCTCAGCCGTGGGGCGCGGCGCCAAGGGCGTGGTGTTCCTGGCGCGCGCCGATGGCCGGTGGTCGAGCGAGTGCTTGGCGCTGAAAGTGATGTCGAAGGCGCTGATTGCGCAGAAGAGGACGAGAAAGGAGGAGGAGTACGGGAGAGTGTCGTTTGAGGAGGAAGTGCTCCGTCGTTTCGATCATCCGCTCTTGCCGAGGCTGAGAGGCGTTTTGGAAACGGAGAAAGTGGTTGCGTTCGCCATTGATTACTGCCACGGTGGTACGCTCCATTCTCTCAGGAAGAAACAGACTGAGAAAATGTTCTCCGATGACACCATCAGGTTTTACGCTGTGGAATTGGTGCTGGCATTGGAATATTTACACGAATTGGGAATAGTATACAGAGATTTGAAGCCAGAAAATGTGATGATTCAAGAAAACGGCCACGTAATGCTAGTCGATTTTGATCTCTCCAAAAAGCTAAATCCTAAATCCCCTCACTCACTGAGTCACAACTCGTCACCGAGTCCTAAATCAGAGAAACGCACAAGGAAACAGCAACGGTTAACTCGTTTATACAGTTTTTGTAACTCGGGCATCTCGCCGTGGGACTCGGACTCGGAGCCCCCACTGAGTAGCGCCGACTCAGTGCGTCGCACCGAGTCCGACTCGGTTGAGAAATCAAACTCGTTCGTCGGAACAGAAGAGTACGTGGCACCCGAAATCTTATCAGGGAAAGGTCACGGTTTTAGCGTAGACTGGTGGTCATACGGCGTTCTTTTGTACGAGATGCTGTACGGAACGACGCCGTTTAAGGGCTCAAATAGAAAGGAAACGTTTTACCGAATTTTAACGAAAGAGCCAGAGTTGACGGGAGAGAAGACGGCGTTACGGGATTTAATTGGAAGATTGTTGGAAAAAGATCCCGACCGTCGGATCCAGGTGGAGGAGATGAAGGGCCATGATTTCTTTAAAGGGGTTAAGTGGGAGGAAGTATTGCACATTGCAAGACCACCTTATATTCCGGAAAGTGAGGTTGAGAAGAAAGTGGGGTTTAGCAAAAACGAGGTGGAAGTGTTCGTGAACGAAGTGTTCTTTCCCACGAATGATGATGACGGCGTAGAGCAAACCAAAAGGGTGTTGGAAAAGAAGGATAATAATTGTGAGAATAATACAGCAGCATGGGTTGATGAGTTTTGA 1239 0.4972 MSDRESASDRSLNFDDVAVVSAVGRGAKGVVFLARADGRWSSECLALKVMSKALIAQKRTRKEEEYGRVSFEEEVLRRFDHPLLPRLRGVLETEKVVAFAIDYCHGGTLHSLRKKQTEKMFSDDTIRFYAVELVLALEYLHELGIVYRDLKPENVMIQENGHVMLVDFDLSKKLNPKSPHSLSHNSSPSPKSEKRTRKQQRLTRLYSFCNSGISPWDSDSEPPLSSADSVRRTESDSVEKSNSFVGTEEYVAPEILSGKGHGFSVDWWSYGVLLYEMLYGTTPFKGSNRKETFYRILTKEPELTGEKTALRDLIGRLLEKDPDRRIQVEEMKGHDFFKGVKWEEVLHIARPPYIPESEVEKKVGFSKNEVEVFVNEVFFPTNDDDGVEQTKRVLEKKDNNCENNTAAWVDEF* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00959 412 MobiDBLite consensus disorder prediction 217 240 - -
Lapu10g00959 412 FunFam Serine/threonine-protein kinase OXI1 239 356 - -
Lapu10g00959 412 FunFam Serine/threonine-protein kinase OXI1 108 176 - -
Lapu10g00959 412 Gene3D Transferase(Phosphotransferase) domain 1 237 356 - -
Lapu10g00959 412 ProSiteProfiles Protein kinase domain profile. 17 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00959 412 Pfam Protein kinase domain 239 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00959 412 Pfam Protein kinase domain 20 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00959 412 Gene3D Transferase(Phosphotransferase) domain 1 108 177 - -
Lapu10g00959 412 MobiDBLite consensus disorder prediction 176 199 - -
Lapu10g00959 412 SMART serkin_6 17 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00959 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Lapu10g00959 412 SUPERFAMILY Protein kinase-like (PK-like) 18 359 IPR011009 -
Lapu10g00959 412 MobiDBLite consensus disorder prediction 217 231 - -
Lapu10g00959 412 PANTHER FLIPPASE KINASE 1-RELATED 9 362 - -
Lapu10g00959 412 Gene3D Phosphorylase Kinase; domain 1 18 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00959 Lapu-Chr10 11368933 11372054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00959 1 409 AGC Kinase Gene Family AT3G25250 55.213 3.18e-152 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu10g00959 Pkinase 3.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00959 K20714 - gmx:100785773 622.854