Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00942 ATGGTTTCACCTCTGTTTTCCTTTCTTCTTTGCTCAATGGTGCTGCTACACATCTTTGTTGTAGCACAAGGTAGAAGCAACAAAGTCATTGATCACTCTCTTAAAGAAACTAGCAAAGCCTCATGGGTAGTTTCACCTTCTAGTGAGATAAACCAAACCAGAAGAAGCATAACTGTTGGTGATTCTCTTTTTGCAGAAACAACTAACTCCTCAACATGGGTGGTTTCACCTCTTGGTGACTTTGCCTTTGGGTTTCTTCCACTTGAAGGCACTGATCATTTCTTACTTTCCATTTGGTATGCTAAGATTCGGGAGAAGACTGTTGTTTGGTATGCTAATGGAGACACTCCTGCTCCAAAGGGGTCAAAGGTTGAACTCACTGAAGATGATGGGTTAGTCCTCACTGCCCCAAATGGTGAACAATTATGGAAAATTAAGAGCCTTGATGGTAAAGTTCATCATGGTTTCTTAAAGGACAATGGAAACTTTGTGCTTGTGGATGAAAATCATCAGGGTCTGTGGGAGACTTTTAAGCATCCAAGGGACACCTTGTTGCCCTCACAACGTCTTGAAAAAGGAGAGAGGCTTTCATCAAGATTTCTAGAGTCAAATTACTCAGATGGAAGGTTTGAGATGCTTCTTCAAATGGATGGTATTCTTTCCATTCATGCTTTGAACTCACCCTCTGGATATGCCAATGAAAACTACTATGAAAGTAGGACTGAAGAGTCCAACACATCAAGTCCTGGAATTCGGTTGGTGTTTGAACCATCAGGGTATGTGTATGTTTTGAGGAAGAACAATGAGAAATACAACTTGTCAACATGGAGTGGAGCCTCTGCTAATCAATCTTACTTCAGAGCAACTCTTAATTTTGATGGGGTGTTTACACTCTATCAACATTCAAAGAGTTCATTTGGGAGTGATGGTTGGAGTGCTATTTGGTCTCAGCCAGATAACATCTGTCTCAGCAGGCTTGCTACTGAAGGTAGTGGTGTTTGTGGGTTTAATAGTGTCTGTACGTTGGGAACTAATCAAAGGCCAAGTTGTCAATGCCCAAAATGGTACTCTTTAGTTGACCCTAATGATCCCTATGGTAGCTGCAAGCCAGATTTCATACAAGGATGTGCTGAAGATGAACTCATTGGAAAAGAAGGTATAGCAGAATATGATTTTGAGGTGTTGATAAATACAGATTGGCCTCTTTCAGATTACGTGCTTCTTAAGCCCTTTACTGAGGAACAATGTAAACAGTCATGTTTGGAAGATTGTATGTGTGCAGTTACCATCTACAAATCAGGTAACGACTGCTTCAAGAAGAAGTTGCCTCTTTCAAATGGTAGAGTTGATGTTGGACTTAGTGGTGCAAAGACTTTCATCAAAGTGAGGAAAGATAATTCCTCTCTGGTTGTTCCAAAAGCCAAAGTGAATGAGAATAGTGAGAGCTCTTTGAGTTTGGTTGCTTGGGTACTTTTTGGAAGCTCTTCATTTCTCAATGTCATATTTATTGGAGCCTTATGCATGAGCTTTTTCTTCATTTTTCAGTACAAGAAGAAGCATAGAGGAATTTGCAAAAGTGACAATGCCCTTGAAACTAACTTGCGTTGCTTCGGTTATGAGGAGCTTGAAATAGCTACAAATGGTTTCCAAAAAGAGTTAGGAAGAGGGTCTTTTGGTGTTGTTTATGAAGGAGTCATAAACATAGGCTCAACAATTCCAATAGCAGTGAAAAAATTGAACACTTTGCTTTTCCAACAAGTTGAGATGGAGTTTAAGAACGAGTTACATGTCATTGGTCTCACTCATCACAAGAACTTGGTTCGGTTGATAGGCTATTGTGAGGCTGAAGAAGAAAGATTGTTGGTTTATGAGTACATGAACAATGGCACTTTGGCAAGTCTTATTTTCAATAAGGTGAAACCTGATTGGAAACTAAGGTTAGAGATTGCATTTGGGGTTGCTAGAGGACTTGCATATTTGCATGAAGAGTGCATCACTCAGATTATCCACTGTGACATAAAGCCACAAAACATACTCCTTGATGAGTACTATAATGCAAGAATTTCTGACTTTGGATTGGCCAAGCTCTTGAAGATGAATCAAAGCAGAACCAACACAGCCATAAGGGGAACAAAAGGGTATGTGGCACTTGAATGGTTTAAGAACATGCCTATCACAACCAAAGTGGATGTCTATAGCTATGGTGTGTTGTTGCTTGAGATTATTTGCTGCAGAAGAAATGTAGAAATGGATCAAGAAGAGGAAGAGAAGGCTATATTAATTGATTGGGCTTGTGATTGCTACTCAAGAGGCACTTTTGATCCCTTGGTTAAAGATGACAAGGAGGCATTGGATGACAAAAGGAACATGAAGAAGTTGGTGATGATTTCCATTTGGTGCATTCAAGAAGATCCAAGTCTTAGACCAACCATGAGAAAAGTGACACAGATGCTTGAAGGTGTTGTAGAAGTACAACCTCCACCATTCTCCTCACAATTTAGTAGACATTCTCAAAATCCATGA 2523 0.3991 MVSPLFSFLLCSMVLLHIFVVAQGRSNKVIDHSLKETSKASWVVSPSSEINQTRRSITVGDSLFAETTNSSTWVVSPLGDFAFGFLPLEGTDHFLLSIWYAKIREKTVVWYANGDTPAPKGSKVELTEDDGLVLTAPNGEQLWKIKSLDGKVHHGFLKDNGNFVLVDENHQGLWETFKHPRDTLLPSQRLEKGERLSSRFLESNYSDGRFEMLLQMDGILSIHALNSPSGYANENYYESRTEESNTSSPGIRLVFEPSGYVYVLRKNNEKYNLSTWSGASANQSYFRATLNFDGVFTLYQHSKSSFGSDGWSAIWSQPDNICLSRLATEGSGVCGFNSVCTLGTNQRPSCQCPKWYSLVDPNDPYGSCKPDFIQGCAEDELIGKEGIAEYDFEVLINTDWPLSDYVLLKPFTEEQCKQSCLEDCMCAVTIYKSGNDCFKKKLPLSNGRVDVGLSGAKTFIKVRKDNSSLVVPKAKVNENSESSLSLVAWVLFGSSSFLNVIFIGALCMSFFFIFQYKKKHRGICKSDNALETNLRCFGYEELEIATNGFQKELGRGSFGVVYEGVINIGSTIPIAVKKLNTLLFQQVEMEFKNELHVIGLTHHKNLVRLIGYCEAEEERLLVYEYMNNGTLASLIFNKVKPDWKLRLEIAFGVARGLAYLHEECITQIIHCDIKPQNILLDEYYNARISDFGLAKLLKMNQSRTNTAIRGTKGYVALEWFKNMPITTKVDVYSYGVLLLEIICCRRNVEMDQEEEEKAILIDWACDCYSRGTFDPLVKDDKEALDDKRNMKKLVMISIWCIQEDPSLRPTMRKVTQMLEGVVEVQPPPFSSQFSRHSQNP* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00942 840 ProSiteProfiles Protein kinase domain profile. 547 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00942 840 Pfam D-mannose binding lectin 107 192 IPR001480 -
Lapu10g00942 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 51 178 - -
Lapu10g00942 840 Pfam Protein kinase domain 550 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00942 840 Gene3D Phosphorylase Kinase; domain 1 522 625 - -
Lapu10g00942 840 CDD B_lectin 75 180 IPR001480 -
Lapu10g00942 840 Gene3D Transferase(Phosphotransferase) domain 1 626 828 - -
Lapu10g00942 840 SUPERFAMILY Protein kinase-like (PK-like) 534 832 IPR011009 -
Lapu10g00942 840 Gene3D - 179 308 IPR036426 -
Lapu10g00942 840 FunFam Serine/threonine-protein kinase 181 325 - -
Lapu10g00942 840 ProSitePatterns Protein kinases ATP-binding region signature. 553 578 IPR017441 GO:0005524
Lapu10g00942 840 ProSiteProfiles Bulb-type lectin domain profile. 60 178 IPR001480 -
Lapu10g00942 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 107 232 IPR036426 -
Lapu10g00942 840 PIRSF SRK 36 840 IPR024171 GO:0004674
Lapu10g00942 840 Gene3D - 60 178 IPR036426 -
Lapu10g00942 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 626 826 - -
Lapu10g00942 840 SMART serkin_6 547 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00942 840 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 66 830 - -
Lapu10g00942 840 FunFam S-receptor-like serine/threonine-protein kinase 516 625 - -
Lapu10g00942 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 668 680 IPR008271 GO:0004672|GO:0006468
Lapu10g00942 840 SMART blect_4 60 180 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00942 Lapu-Chr10 11187977 11196569 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00942 533 829 Receptor kinase-like Gene Family AT1G60800 38.608 1.59e-69 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu10g00942 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00942 - - pvu:PHAVU_010G032000g 1562.74