Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00941 ATGAAGCAGGGAGTGCTAACACCTGGTCGTGTTCGTCTTTTGCTCCACAGAGGAACTCCTTGCTTCCGTGGGTATGGAAGGCGCAATGGAGAGCGTAGGAGGAAGTCTGTCCGTGGGTGCATTGTCAGCCCAGATCTCTCTGTTCTGAACTTGGTAATTGTGAAAAAGGGAGAAAATGATTTACCAGGGCTGACTGATGTTGAAAAGCCAAGAATGAGAGGTCCAAAGAGAGCATCGAAGATTCGTAAGCTGTTCAACCTGTCTAAGGAAGATGATGTGAGGAAGTATGTCAACACATACCGTAGAACCTTCACAACAAAATCTGGGAAAAAGGTGAGCAAAGCTCCGAAGATTCAGCGACTGGTCACTCCATTGACACTGCAAAGAAAGCGAGCAAGGATCGCTGATAAGAAGAAGAGAATTGCAAAGGCAAAATCGGAGGCAGCTGAGTATCAGAAACTTCTTGCCTCCAGATTGAAGGAGCAGAGGGAACGCCGCAGTGAGAGTTTGGCAAAGAGGAGGTCCAAGCTTTCCAGTGTTTCCAAGCAGCCTGCCGCTGCATAG 564 0.4823 MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSSVSKQPAAA* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00941 187 MobiDBLite consensus disorder prediction 157 175 - -
Lapu10g00941 187 Pfam Ribosomal protein S6e 1 66 IPR001377 GO:0003735|GO:0005840|GO:0006412
Lapu10g00941 187 MobiDBLite consensus disorder prediction 157 187 - -
Lapu10g00941 187 PANTHER 40S RIBOSOMAL PROTEIN S6 1 178 IPR001377 GO:0003735|GO:0005840|GO:0006412
Lapu10g00941 187 Gene3D - 71 172 - -
Lapu10g00941 187 Coils Coil 127 154 - -
Lapu10g00941 187 SMART Ribosomal_S6e_2 1 66 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00941 Lapu-Chr10 11182599 11186109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00941 1 187 Cytoplasmic Ribosomal Protein Gene Family AT4G31700 87.701 2.18e-109 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00941 K02991 - gmx:100801194 314.309