Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00940 ATGGTCAAGTCTTGTTGTACTATGTGCTTGGGTTTGGTCTTACTTCATCTTTTCCTGTGCTTTGTATTAACACAATCAGCACCAGAAAGTGCTATTGTGTCACAAGTTCCTGGCTTCAGTGGGACTCTACCTTCCAAGCACTATGCTGGGTATGTGACAGTGGGTGAGAGGAAGAACTTGTTCTACTATTTTGTTGAATCAGAGGGTAAACCTTCTGAGGACCCTGTGGTTCTGTGGCTTAATGGGGGACCTGGCTGCTCTAGCTTTGATGGATTCGTATATGAGCATGGTCCTTTTAATTTTGAGGCAGCAAAGACAAAGGGGGGTCTTCCGACACTACACCTCAATCCATACAGCTGGTCAAAGGTTTCCAGTATTATATATTTGGATTCTCCTGCTGGTGTGGGGTTTTCATTCTCAAAGAATGAAACTGATTACATAACTGGAGATACAAAGACTGCTTCTGATTCACATGACTTTCTCCTTAAGTGGTTTGAACTATACCCTGAGTTCCTTTCCAACCCGTTCTTCATTGCTGGAGAGTCCTATGCAGGAGTATATGTGCCTACTCTTGCTTCTGAAGTTGTGAAAGGAATTGAGGCTGGTGTGGAGCCCAAACTAAACTTCAAGGGTTACATGGTTGGAAATGGTGTGACAGATGAACAATTTGATGGCAATGCTCTTGTTCCATTTGTACATGGGATGGGACTTATCTCAGATGACCTGTTTAAGGAGGTGAACAGTGAGTGCAATGGAAATTTTTATAATTCAACCAGTGAAAGTTGTTCTGGCAAGCTTGCAAAAGTTGATGAGTTGGTGGATGGGATAAATATTTACAACATCCTAGAACCATGCTATCACGCTACAGAGGCAGTGAAGATTACAGAATCCTATATTAGGTTGCCATCTAGCTTCCGGAAGTTGGGTGAGACTGAAAAACCTTTTCCAGTGAGGAAAAGAATGTTCGGTCGTGCTTGGCCCCTGAGAGCACCTGTGAGAGATGGAATTGTACCAACTTGGCCACAGCTGGTGAATCTGCAGGTTGCTCCACCATGCACAGACGATGAGGTTGCAAACGCATGGTTGAACGATGAAGCAGTCAGGACAGCAGTTCATGCTGCACAGAAAAGTGAAGTCAGTAGTTGGGATATATGCACAGAGAGAATTACCTTTGATCATGATGCCGGGAGCATGATCAACTACCACAAGAACTTAACTTCCAAAGGTTATAGAGCACTTATATTCAGTGGTGATCATGACATGTGTGTTCCTTATACGGGAAGTCAAGCGTGGACAAGATCGATTGGATACAAGATTGTTGATGAATGGAGGCCATGGTCTTCCAATGGTCAAGTTGCTGGGTATACACAAGGATATGACAAAAATCTTACTTTTCTGACCGTAAAGGGATCTGGGCATACTGTTCCTGAATACAAACCACGAGAGGCATTGGACTTTTACAAACGCTTTCTTGCTGGATTGCCAATATGA 1491 0.4346 MVKSCCTMCLGLVLLHLFLCFVLTQSAPESAIVSQVPGFSGTLPSKHYAGYVTVGERKNLFYYFVESEGKPSEDPVVLWLNGGPGCSSFDGFVYEHGPFNFEAAKTKGGLPTLHLNPYSWSKVSSIIYLDSPAGVGFSFSKNETDYITGDTKTASDSHDFLLKWFELYPEFLSNPFFIAGESYAGVYVPTLASEVVKGIEAGVEPKLNFKGYMVGNGVTDEQFDGNALVPFVHGMGLISDDLFKEVNSECNGNFYNSTSESCSGKLAKVDELVDGINIYNILEPCYHATEAVKITESYIRLPSSFRKLGETEKPFPVRKRMFGRAWPLRAPVRDGIVPTWPQLVNLQVAPPCTDDEVANAWLNDEAVRTAVHAAQKSEVSSWDICTERITFDHDAGSMINYHKNLTSKGYRALIFSGDHDMCVPYTGSQAWTRSIGYKIVDEWRPWSSNGQVAGYTQGYDKNLTFLTVKGSGHTVPEYKPREALDFYKRFLAGLPI* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00940 496 Gene3D alpha/beta hydrolase 25 317 IPR029058 -
Lapu10g00940 496 SUPERFAMILY alpha/beta-Hydrolases 33 495 IPR029058 -
Lapu10g00940 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 480 IPR001563 GO:0004185|GO:0006508
Lapu10g00940 496 FunFam Carboxypeptidase 26 308 - -
Lapu10g00940 496 Pfam Serine carboxypeptidase 37 492 IPR001563 GO:0004185|GO:0006508
Lapu10g00940 496 Gene3D - 348 495 - -
Lapu10g00940 496 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Lapu10g00940 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Lapu10g00940 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Lapu10g00940 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Lapu10g00940 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Lapu10g00940 496 FunFam Carboxypeptidase 351 495 - -
Lapu10g00940 496 FunFam Carboxypeptidase 398 493 - -
Lapu10g00940 496 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00940 Lapu-Chr10 11172909 11178858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00940 357 496 Calmodulin-binding Proteins AT2G22960 46.429 1.20e-40 142