Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00937 ATGGATTTGGAAGCTGTGGCAGAAACAGTTGAAAATTCTACTGATAAAATATCAGCAGCATGTGAAGGCAGTTCTATTGGGCAGCCAAATGTTGGTATGGAGTTTGAGTCAGAGGAAGCTGCCAAAAACTTTTATGACCAATATGCAAGACAGGAAGGGTTTGTTGTGCGCCTTGATCGCTGCCATCGTTCTGAGGTTGACAACCGAATCATTTCGCGTCGTTTTTCATGCAACAAGCAAGGTTTTCATGTGAGGGTCAGGAATAAAAGCAAGCCTGTTCATAAACCACGGAGTAGCATAAGAGAAGGTTGTGAAGCCATGATGTTGGTTAAAGTTAATAAATGTGGGAAGTGGGTGGTTACTAAATTTGTGAAGGAGCACAGTCATTTGCTAAATGTTTCTGGTTCACCTTCATATAGTAAAATGATTGAGTCAAAGGATAGGATAATACAACAACTCACAAAGGAACTGGAGTACCGAGATCAATTATGTCAGCAATATCGCAGGTTGCTATTCTCCCTTCTGGAGACTGTTGAAGAACAAACAGAAAGTTTATCAAAAAATGTTCAGCTTGTTGTTAACAATATAAAAAAACTTGAGAATGAAGTGCAAAAACCTTATAACATTGACAAATTTTCACACAAGATTTGTTAG 654 0.3853 MDLEAVAETVENSTDKISAACEGSSIGQPNVGMEFESEEAAKNFYDQYARQEGFVVRLDRCHRSEVDNRIISRRFSCNKQGFHVRVRNKSKPVHKPRSSIREGCEAMMLVKVNKCGKWVVTKFVKEHSHLLNVSGSPSYSKMIESKDRIIQQLTKELEYRDQLCQQYRRLLFSLLETVEEQTESLSKNVQLVVNNIKKLENEVQKPYNIDKFSHKIC* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00937 217 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 201 - -
Lapu10g00937 217 Coils Coil 182 202 - -
Lapu10g00937 217 Pfam FAR1 DNA-binding domain 43 132 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00937 Lapu-Chr10 11141322 11143950 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu10g00937 FAR1 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00937 - - pvu:PHAVU_010G032600g 373.629