Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00913 ATGGTTCCGAGTAGCTGGATTTGCAGATACAATGTTGTTAGTTTCTTGTTGCTGATTAGTTGTGGCATGATCTATGGGACTGAGACTGATATCTTCTGCTTGAAAAGTATCAAAGAGGCCCTTGAAGACCCTTATAACTATTTGAAGTTTTCTTGGGATTTCAAGAACAGAACTGAAGGGTTCATCTGCAAGTTTATTGGGGTTGAGTGTTGGCACCCTGATGAGAACAGGGTCTTGAATCTCAGACTGTCCAATATGGGACTCAAGGGCCAGTTTCCTCGTGGCATTCAAAATTGCTCTAGCTTAACTGGGTTAGACCTTTCAATTAACAAACTCAATGGAACCATCCCAGGAGATATATCTACTCTTGTACCATTTGTGACGTCTCTTGATCTTTCTTCAAATGAATTTTCTGGGGCAATTCCTGTGACTCTTTCAAATTGTACATTTCTCAATAGCCTTAAACTTGATCAGAACAGACTCACTGGTCAAATTCCTCTACAACTTGGTATTCTTCAACGGATCAAGACGTTTAGTGTATCCAACAATCTTTTGACGGGGCCTGTCCCAACCTTTGGCCATTCAGTTTCAGTAAATTATGCAAATAATCAAGGCCTATGTGGAGTTGGAGTGGGGTCTTGCCAAACCAAGAAGTCTAAGAGTAACATGGCTGTTATTGCTGGAGCTGCCGCTGGTGGGGTGACTCTTGCAGCATTAGGATTGGCTGTTGGAATGTTCTTCTTTGTGCGACGTGGTTCTTTCAAGAAGAAGGAAGAGGACCCTGAAGGAAACAAATGGGCGAGAAGTCTAAAAGGAACTAAACAAATTAAGGTTTCTATGTTTGAGAAGTCAATCTCAAAAATGAAGTTGATTGATCTCATGAAGGCTACTAACAATTTCAGTAATACCAATATCATTGGTTCAGGAAGAACAGGAACTGTTTACAAAGCTGTCCTTGGTGATGGCACAACACTTATGGTTAAGAGATTACAGGAATCTCAGTACAGTGAAAAGGGATTCATGTCTGAGATGGGTACACTAGGGACTGTCAAACATCGCAACCTTGTTCCTCTTTTAGGCTTTTGCATGGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAACATGCCAAACGGCAATCTTCATGACCAACTCCATCCTGCCGATGGTGTGAGCACCCTTGACTGGACTACAAGACTCAAAATTGCAATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAACCCCCGCATTCTCCACCGAAACATAAGCTCGAAGTGCATCTTGTTGGACGAAGATTTCGAGCCGAAAATTTCTGATTTCGGCCTTGCCAGACTGATGAACCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGTGATTTGGGTTATGTTGCTCCTGAGTACACAAGAACTTTGGTTGCTACACCGAAAGGGGATGTTTATAGCTTTGGGACTGTTCTTCTTGAGTTGGTGACTGGTGAAAGACCTACCAATGTGGCTAAAGCTCAAGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACTGAGCTAACAAACAATGCAAAACTCCATGATGCCATTGATGAATCATTAGTGAACAAGGATGTTGACAGTGAGCTTTTCCAATTTCTGAAGGTTGCATGCAACTGTGTTCTGCCAACTCCAAAGGAGAGGCCAACCATGTTTGAAGTGTATCAGTTTTTAAGATCCATTGGGGGTAGATACAATTTCACAACTGATGATGAGCTATTGGTACCTACTGATAATGTTGATGCTGATAACATGGAGGAACTCATTGTAGCTAGAGAATGA 1830 0.4175 MVPSSWICRYNVVSFLLLISCGMIYGTETDIFCLKSIKEALEDPYNYLKFSWDFKNRTEGFICKFIGVECWHPDENRVLNLRLSNMGLKGQFPRGIQNCSSLTGLDLSINKLNGTIPGDISTLVPFVTSLDLSSNEFSGAIPVTLSNCTFLNSLKLDQNRLTGQIPLQLGILQRIKTFSVSNNLLTGPVPTFGHSVSVNYANNQGLCGVGVGSCQTKKSKSNMAVIAGAAAGGVTLAALGLAVGMFFFVRRGSFKKKEEDPEGNKWARSLKGTKQIKVSMFEKSISKMKLIDLMKATNNFSNTNIIGSGRTGTVYKAVLGDGTTLMVKRLQESQYSEKGFMSEMGTLGTVKHRNLVPLLGFCMAKKERLLVYKNMPNGNLHDQLHPADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPRILHRNISSKCILLDEDFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTGERPTNVAKAQETFKGNLVEWITELTNNAKLHDAIDESLVNKDVDSELFQFLKVACNCVLPTPKERPTMFEVYQFLRSIGGRYNFTTDDELLVPTDNVDADNMEELIVARE* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00913 609 Gene3D Phosphorylase Kinase; domain 1 261 373 - -
Lapu10g00913 609 SUPERFAMILY Protein kinase-like (PK-like) 277 574 IPR011009 -
Lapu10g00913 609 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 375 595 - -
Lapu10g00913 609 SUPERFAMILY L domain-like 30 196 - -
Lapu10g00913 609 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 52 191 - -
Lapu10g00913 609 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 261 374 - -
Lapu10g00913 609 Pfam Protein kinase domain 302 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00913 609 ProSiteProfiles Protein kinase domain profile. 300 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00913 609 FunFam Nuclear pore complex protein NUP107 27 191 - -
Lapu10g00913 609 Gene3D Transferase(Phosphotransferase) domain 1 375 590 - -
Lapu10g00913 609 CDD STKc_IRAK 306 574 - -
Lapu10g00913 609 Gene3D Ribonuclease Inhibitor 28 214 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00913 Lapu-Chr10 10893890 10900554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00913 16 588 Receptor kinase-like Gene Family AT3G28450 46.484 4.74e-178 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lapu10g00913 Pkinase 5.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00913 - - gmx:100305365 956.051