Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00899 ATGATGACTCTAAGCACGTGTTTCAACTGGGACACTGTTCAAATTTGCAATTCAGAAACAAACCCTTTCCACGAAATCACTCAAGAAGAATTAGCAACACCAAATCTCCAACACCTTTTCTCCTACTCAGATGAAAACTTCTTTCTGTCAAACGTGTCTTTTGAGAACTACATTGACCCCACTGGTGGTTCTCTCACACATCATAACATTTTTCCAACTCAAGAAGATACTCTTCTGCCATCTCCTAAACGCCAAAAATGTTGCTATGAAACATCCCATTACTTGGATAGATTTGTTGCACCTTATGATAATTTTCACTTTTTACAAGGAGAGGAACTGCAACAACAAATATGTGAGTTTGCACAACTTGATAGTAATTGTGTGGATCTTAAATGTGAGAAGAAAGAGAAGGAGAGAACAATATCTCCACAAAGCGTAGCCGCACGAGAAAGGAGAAGGAAGATCAGTGATAAGACCCAGCAACTTGGAAGGTTGGTTCCTGGTGGACTAAAGATGAACACAGCTGAGATGCTTCATGCTGCTGCAAAGTATGTTAAGTACCTTCAAGCCCAAGTTGAGATGCTTGAACTCAAGAATTCACTAGAGGAAGATAAAGCAGCACCTCCCTCTGCAATGCTACACACTCTGGTTGTTTCTCCCTTAGTTCAAGAGAAGTTATATGCAGAGGAAATGTGCTTTGTGCCAAAAGAAACTGTGATCACTTTGACAAATCATGAAGGTGTTCAATCTAGACCTACCATGGTCGAAGATCTTAAACAGCTCATAGGGACAAACCTTGAGAAGAAAGAACAAGTATAA 819 0.4005 MMTLSTCFNWDTVQICNSETNPFHEITQEELATPNLQHLFSYSDENFFLSNVSFENYIDPTGGSLTHHNIFPTQEDTLLPSPKRQKCCYETSHYLDRFVAPYDNFHFLQGEELQQQICEFAQLDSNCVDLKCEKKEKERTISPQSVAARERRRKISDKTQQLGRLVPGGLKMNTAEMLHAAAKYVKYLQAQVEMLELKNSLEEDKAAPPSAMLHTLVVSPLVQEKLYAEEMCFVPKETVITLTNHEGVQSRPTMVEDLKQLIGTNLEKKEQV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00899 272 Pfam Helix-loop-helix DNA-binding domain 149 189 IPR011598 GO:0046983
Lapu10g00899 272 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 136 237 IPR045843 GO:0003700|GO:0006355
Lapu10g00899 272 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 200 IPR036638 GO:0046983
Lapu10g00899 272 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
Lapu10g00899 272 Gene3D - 134 207 IPR036638 GO:0046983
Lapu10g00899 272 SMART finulus 145 194 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00899 Lapu-Chr10 10797336 10798485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00899 37 266 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 35.156 6.49e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu10g00899 HLH 4.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00899 - - gmx:102665938 348.206