Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00880 ATGATGGACTCCATGGTGGGGGAATCAAGAAAGTGGGTGATTCTTGTAGCAGCAATATGGGTGCAGGCATTGACTGGCACAAACTTTGACTTTTCATCATACTCTTCAGACCTAAAATCTGTGCTTGACATAACTCAGCTTCAGCTGAATTACCTCTCTGTGGCTTCAGACATGGGAAAGGCCTTTGGGTGGTGTTCAGGTCTCTCTCTCATCCATTTCCCTTTCTGGGTGGTTTTGTTCATGGCTGCTTTCTTTGGACTCTTTGGCTATGGCTTTCAATGGCTTCTCATTCATAGCTTCATCACTTTGCCTTATTCTGTGGTTTTTTTTCTATGTCTGATTGCTGGCTGCAGCATCTGCTGGTTCAACACCATCTGCTATGTCCTATGCATCAGACATTTTCCTACAAACCGTTCACTTGCTTTATCCTTGAGCGTTAGTTTCAATGGTGTGAGTGCAGCTTTGTACACTCTCATTGCCAATGCAATAAACTCAAAAGATGACACTCTCTACCTTTTACTCAATGCCATAGTTCCTGTGCTGATATCTGTTCTAGTACTCATCCCAATTCTCCATCAACCACAGCCTCAACCACATTCTGTTGACACCATTCAGCATGATTCATCAATTTTCCTCTGCCTCAACATCCTTGCCCTTGTCACAGGCCTCTACCTGCTCTTCCTATATTCCTTCTCTTACACAGCTGCCATTGCTCGGTTAATCCTTGTAGGTGCCCTTTTTCTCCTTGTAATGCTCATTTTTGTGCCTGCTGTTGTGTCTTCTAGAAAATCTTCTTGCTTTAGTCTCCCCACAAGCTTTTCCTTCTACTACTCAAGATTCACTTGCACTGACTCCGATGAAAATGAGCTTTATCAAGAGCTCATTAGTATCAAGGATAGCGCAAGGACTAAAAGTGCAGAAAGCACAAGAGAGAAGAAATGTTGTTTACTGAATGTGTTGGAGAGAGAGCAGCTTACAATGCTAGGGGAAGAGCATTCAATAAAGTTGCTAGTGCATAGATGGGACTTCTGGCTGTACTACATAGCATATTTCTGTGGAGGAACAATTGGGTTGGCTTACAGCAACAACTTGGGGCAAATTTCCCAATCACTGGGACACTATTCTCAGACTTCTTCTCTTGTCACACTCTACTCCACATGTTCTTTCTTTGGTCGCCTTCTTGCAGCCGCACCTGACTTCTTAAGCAGGAAAATACAGTTTGCAAGAACTGGATGGTTTGCTGCAGCCTTGGTGCCAACACCAATTGCATTCATTTTGCTGGCCATGTCTGGCAGTGGAGCAGCATTGCACATTGGCACTGCCTTGATAGGGTTGAGTTCAGGCTTTGTGTTTTCTGCAGCAGTGTCTATTACCTCAGAGCTATTTGGTCCAAACAGTGTTGGAGTGAACCACAACATCCTCATCACCAACATTCCTTTAGGTTCATGTCTCTATGGCCTTCTTGCAGCCTTGGTTTATGATTCCAATGCAATGAACTCAAAGCAAGCAATTTGGCTGCGAGAAATGTCCATGTGCATGGGGAGGAAGTGCTACCTACAAACCTTCATATGGTGGAGTTGCATTTCGATGGTGGGGTTGGTTTCAAGTTTATTGTTCTTCATAAGGACTAAACAAGCTTATGACAATTTTGAAAGGAATAGTAACAGAAACAATACAACTACAGAATAA 1689 0.4334 MMDSMVGESRKWVILVAAIWVQALTGTNFDFSSYSSDLKSVLDITQLQLNYLSVASDMGKAFGWCSGLSLIHFPFWVVLFMAAFFGLFGYGFQWLLIHSFITLPYSVVFFLCLIAGCSICWFNTICYVLCIRHFPTNRSLALSLSVSFNGVSAALYTLIANAINSKDDTLYLLLNAIVPVLISVLVLIPILHQPQPQPHSVDTIQHDSSIFLCLNILALVTGLYLLFLYSFSYTAAIARLILVGALFLLVMLIFVPAVVSSRKSSCFSLPTSFSFYYSRFTCTDSDENELYQELISIKDSARTKSAESTREKKCCLLNVLEREQLTMLGEEHSIKLLVHRWDFWLYYIAYFCGGTIGLAYSNNLGQISQSLGHYSQTSSLVTLYSTCSFFGRLLAAAPDFLSRKIQFARTGWFAAALVPTPIAFILLAMSGSGAALHIGTALIGLSSGFVFSAAVSITSELFGPNSVGVNHNILITNIPLGSCLYGLLAALVYDSNAMNSKQAIWLREMSMCMGRKCYLQTFIWWSCISMVGLVSSLLFFIRTKQAYDNFERNSNRNNTTTE* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00880 562 Gene3D MFS general substrate transporter like domains 294 541 IPR036259 -
Lapu10g00880 562 Pfam Nodulin-like 11 260 IPR010658 -
Lapu10g00880 562 SUPERFAMILY MFS general substrate transporter 216 545 IPR036259 -
Lapu10g00880 562 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 548 - -
Lapu10g00880 562 SUPERFAMILY MFS general substrate transporter 10 199 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00880 Lapu-Chr10 10655538 10661985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00880 2 554 Nodulin-like Gene Family AT1G31470 54.234 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00880 - - gmx:100804951 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00880 10 10655538 10661985 Lapu10g00880 10 10655538 10661985 ECH