Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu10g00853 | ATGCTCCGCCGCGCAACCTCCGCCCTCCTCTCCGGAGTCTCCCGTAGACGCCTCTCCACCGACGTACCTGCTACGCCCGCTGCGGATTCGAGCTTCGCGCAGGCGTGGAAGAAAGTGAGTCCGAATCTGGACCCTCCGATGACGCCGCTCTCCTTCATGAAGGAGCGGCCGCCCACTCCCTCGGCCCTCCCTTCCAAACTCACCGTCAACTTCGTCCTCCCTTACGCTTCCCAATTGTCCGCCAAAGAGGTTGACATGGTGATTGTACCAGCAACAACTGGGCAGATGGGTGTTCTGCCTGGACATGTAGCAACAATTGCTGAGTTGAAACCTGGTGTCCTCACTGTACATGAAGGGAACGATGTGACAAAGTATTTTGTGAGCAGTGGCTTTGCATTCATCCATGCAAACTCTGTTGCTGACATAGTAGCTGTTGAGGCCGTGCCGGTAGATCGAATCGATGCAACTCTAGTTCAGAAGGGCCTTCAAGATTTCACTCAGAAGCTCAACTCAGCCTCAACTGACTTGGAGAAAGCTGAGGCCCAGATTGGGGTGGACGTCCATAGCGCTCTCAACTCTGCTCTTTCAGCCTGA | 594 | 0.5505 | MLRRATSALLSGVSRRRLSTDVPATPAADSSFAQAWKKVSPNLDPPMTPLSFMKERPPTPSALPSKLTVNFVLPYASQLSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLTVHEGNDVTKYFVSSGFAFIHANSVADIVAVEAVPVDRIDATLVQKGLQDFTQKLNSASTDLEKAEAQIGVDVHSALNSALSA* | 198 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu10g00853 | 197 | Gene3D | - | 154 | 196 | - | - | |
Lapu10g00853 | 197 | Pfam | ATP synthase, Delta/Epsilon chain, beta-sandwich domain | 67 | 139 | IPR020546 | GO:0015986 | |
Lapu10g00853 | 197 | Coils | Coil | 162 | 182 | - | - | |
Lapu10g00853 | 197 | CDD | F1-ATPase_delta | 67 | 190 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Lapu10g00853 | 197 | SUPERFAMILY | Epsilon subunit of F1F0-ATP synthase N-terminal domain | 67 | 148 | IPR036771 | - | |
Lapu10g00853 | 197 | Gene3D | - | 56 | 153 | IPR036771 | - | |
Lapu10g00853 | 197 | FunFam | ATP synthase delta | 56 | 153 | - | - | |
Lapu10g00853 | 197 | Hamap | ATP synthase epsilon chain [atpC]. | 65 | 185 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Lapu10g00853 | 197 | PANTHER | ATP SYNTHASE DELTA/EPSILON CHAIN | 29 | 196 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 | |
Lapu10g00853 | 197 | NCBIfam | ATP synthase F1 subunit epsilon | 72 | 182 | IPR001469 | GO:0015986|GO:0045261|GO:0046933 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu10g00853 | 1 | 197 | Primary Pumps ATPases | AT5G47030 | 69.192 | 6.92e-100 | 285 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu10g00853 | K02134 | - | gmx:100780778 | 355.91 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lapu10g00853 | 10 | 10294338 | 10298021 | Lapu10g00853 | 10 | 10294338 | 10298021 | ECH |