Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00851 ATGAAGTGCTTTTACTATTTCAAAGACAAATCTAGAAACAGTAAGCAAAGATCAGCACCTGAACTGAAAGAGCAAGAGAAACTGGACTTTTCAGGGGCTGAAAGGGTCACCAACTCGTCATGCTCATCTGCCTCACCGCGCGGTATACCGGAACTGTATGAGGAGAAGGGTCACAATTTGAGGGTCTTCTCCTTCTCAGAGCTCAAGCGTGCGACAAGTGATTTCAACAGGCTTTATAAGATAGGAGAAGGTGGATTTGGAAGTGTGTTTAAAGGTTCAATCAAGCCTGCTGATGGAAATGGGAATCCTGTTGTAGTTGCTGTCAAAAGGCTTAACAAGGATGCATTACAGGGTCATAAGCAATGGTTGACCGAAGTTCAGTTTCTTGGGGTTGTGGAACACCCAAATCTCGTCAAGCTTATTGGATACTGTGCTTTGGATGATGAACGAGGCATCCAAAGACTCCTCGTGTATGAATACATGCCGAACAAAAGCTTAGAGTTTCATCTTTTCAACAAAGCATATTACCCTCTTCCTTGGAAAACTAGACTTGAAATAGCACTTGGAGCAGCTCAAGGGTTAACTTATCTTCATGAAGAATTAGAAATTCAGGTGATATATCGAGATTTTAAATCTTCAAATGTATTACTGGATGAAGACTTTAAGCCAAAGCTTTCTGATTTTGGACTTGCTAGGGAGGGGCCAGTAGCTGGCGATACTCATGTTTCAACAGCTGTGATGGGGACATATGGTTATGCTGCTCCAGATTACATTGAGACAGGTCATCTCACTGCCAAGAGTGATGTGTGGAGTTTTGGGGTGGTGCTATATGAAATGCTTACTGGAAGGCGTTCAATGGAAAGAAACAGGCCTAAATCAGAGAAGAAACTGCTGGAGTGGGTGAAGCAATACCCTCCTGATAGCAAGAGGTTTGACACAATAATCGATCAGCGACTTCAAGGAGAGTATTCAATCAATGGAGCGCGAAAGCTTGCCAAACTCGCCGATCATTGCCTGCGAAAGAGTGCAAAAGATCGGCCGACGATGAGACAGGTGGTGGAGAGACTGAAGCATATAATCCAAGACACTGATGAAGAACATCCTGCAGATGACAGAAGTGTTGCTGAGGTATCAGAAAATGATCAAGTTGAAGCTGAAGTGAAGGGAAATCAATTAGGCACCTCAGAGTTGTGGAAAAAGAGGATGGAACATCTTGCAAAACTTGGTGAACGTGTGGAGAGTGCTAGTAGAAGAAGATTGATGATCCTTCAGAGGGCCAATGTGTCCTCATAG 1293 0.4362 MKCFYYFKDKSRNSKQRSAPELKEQEKLDFSGAERVTNSSCSSASPRGIPELYEEKGHNLRVFSFSELKRATSDFNRLYKIGEGGFGSVFKGSIKPADGNGNPVVVAVKRLNKDALQGHKQWLTEVQFLGVVEHPNLVKLIGYCALDDERGIQRLLVYEYMPNKSLEFHLFNKAYYPLPWKTRLEIALGAAQGLTYLHEELEIQVIYRDFKSSNVLLDEDFKPKLSDFGLAREGPVAGDTHVSTAVMGTYGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSMERNRPKSEKKLLEWVKQYPPDSKRFDTIIDQRLQGEYSINGARKLAKLADHCLRKSAKDRPTMRQVVERLKHIIQDTDEEHPADDRSVAEVSENDQVEAEVKGNQLGTSELWKKRMEHLAKLGERVESASRRRLMILQRANVSS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00851 430 FunFam PTI1-like tyrosine-protein kinase 3 161 370 - -
Lapu10g00851 430 Gene3D Transferase(Phosphotransferase) domain 1 161 385 - -
Lapu10g00851 430 SUPERFAMILY Protein kinase-like (PK-like) 58 356 IPR011009 -
Lapu10g00851 430 FunFam Serine/threonine-protein kinase BIK1 43 160 - -
Lapu10g00851 430 PANTHER OS01G0588500 PROTEIN-RELATED 26 360 - -
Lapu10g00851 430 Gene3D Phosphorylase Kinase; domain 1 50 160 - -
Lapu10g00851 430 Pfam Protein kinase domain 76 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00851 430 ProSiteProfiles Protein kinase domain profile. 75 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00851 430 CDD STKc_IRAK 81 359 - -
Lapu10g00851 430 ProSitePatterns Protein kinases ATP-binding region signature. 81 109 IPR017441 GO:0005524
Lapu10g00851 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Lapu10g00851 430 MobiDBLite consensus disorder prediction 360 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00851 Lapu-Chr10 10269085 10275085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00851 61 398 Glycoside Hydrolase AT3G07070 44.286 6.47e-91 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lapu10g00851 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00851 - - gmx:100784625 762.681