Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00850 ATGTTTTTGCAGGAAATGGATCATGAAGAATCTCCTTCATTCAAAGAACATGACATGAACTCTCTTGAGGAAGCACTGAAGGTGGAGAATCTTTCTGGTGGTGATTCAACTATTTTCACTGACATGGGAAATTCTTCATCTGTGGAAGAGAAGAACACAGCAGAAGAGTGTTCTTCAGAGAAAACCAGATTCTCATCCCACAGTCTCTCTTTTGAAGACTCCACTGCATGGCAGCATAATGGGAAACATGAACATTCAAAGGACACTGGAAAGTGCAGAAACAGTTTTCAAACACAAGATCACAAAATTTCTGAGAGGAAGAGGAGAGAGAATCATACCAGATTGTTCCAAACACTTTCTACCATTGTTCCTGATTTGAAAAAGCTGGACAAGTTGTCTATAGTCAACAAAACTGTAGAGTATGTGAAATATCTTCAGAATCGAGTAGAAGTTTTGGAGCAACAAAACAAGAAGAGAAAGACAGAATCTACAATGTTCTTCAAAAACTACAAGCCTAATGTTGATGACTTTTCAGGGATCTCTGAGGGATTAAATGGTTCAAAATTTGTTGATGTTGAAGTAAAAGTCTCTGCAAACGATTTATTCATCAGAGTTATCTGTGACAAAGAAAATGCCATTGTAACAAAGCTATTGCGCAAGCTTGCAGATCACAATCTCTCCATAGCTTATACCAATGTTTTGCCATTTGGAAATTCTACACTGAACATATCCATCATTGCCAAGGTGGAAGGTAGCATGACAATGGATGACGTAGTGAAATTTTTGAATGAGGAATTGTTCAAGTGCTGTAACTTTCGACAGTAG 825 0.3782 MFLQEMDHEESPSFKEHDMNSLEEALKVENLSGGDSTIFTDMGNSSSVEEKNTAEECSSEKTRFSSHSLSFEDSTAWQHNGKHEHSKDTGKCRNSFQTQDHKISERKRRENHTRLFQTLSTIVPDLKKLDKLSIVNKTVEYVKYLQNRVEVLEQQNKKRKTESTMFFKNYKPNVDDFSGISEGLNGSKFVDVEVKVSANDLFIRVICDKENAIVTKLLRKLADHNLSIAYTNVLPFGNSTLNISIIAKVEGSMTMDDVVKFLNEELFKCCNFRQ* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00850 274 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 88 158 IPR036638 GO:0046983
Lapu10g00850 274 MobiDBLite consensus disorder prediction 77 108 - -
Lapu10g00850 274 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 96 145 IPR011598 GO:0046983
Lapu10g00850 274 MobiDBLite consensus disorder prediction 33 52 - -
Lapu10g00850 274 MobiDBLite consensus disorder prediction 1 65 - -
Lapu10g00850 274 Gene3D - 88 162 IPR036638 GO:0046983
Lapu10g00850 274 SMART finulus 102 151 IPR011598 GO:0046983
Lapu10g00850 274 Coils Coil 142 162 - -
Lapu10g00850 274 PANTHER BHLH TRANSCRIPTION FACTOR 40 268 - -
Lapu10g00850 274 MobiDBLite consensus disorder prediction 1 24 - -
Lapu10g00850 274 Pfam Helix-loop-helix DNA-binding domain 99 146 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00850 Lapu-Chr10 10254491 10257463 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00850 92 266 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.659 2.33e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu10g00850 HLH 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00850 - - ccaj:109790958 229.565