Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00847 ATGCAGCTCACTCACCTGTGCCTTATCATGCCCTCAGATTATGATAAACTAGAGCCACTCCATGCAACCCCACCAAAACATAAAGGGACAGAAAAAAAAGTTAAGGCCAAAAAAGACTTCCAAGGGGCATGTGGAGGCCATGTTGTTGCTACCCTTCAAGGTTCCTTGACAAGGTTGTGTGGTACAAAGTGGTGGAGTTGTCACTGGAATTTATGCCAACATGGTGCAAGAGAAAGCAAGCAGATCAAGGCCTCGTCATGTGTGTTTCATGATATGGAGGGTGTGCAACTCTCTTCCAAGATTGGAAGGGACAGCAACAATCCGAGGATTTTCAGCTATGCTGAGCTTTACATAGGGTCAAGGGGTTTCTCTGAGGAGGAGGTTCTAGGCAGTGGAGGGTTTGGCAAAGTGTACAAAGCTGTTATGCCTAGTGATGGAACAGTGGTGGCTGTGAAGTGTTGCTTGGCAGGGAAAGGTGGCCAGTTTGAGAAGACTTTTGCAGCAGAACTAGCGGCAGTGGCACACCTTCGCCACAAAAACCTTGTTCCCTTGAGGGGTTGGTGTGTTTTTGAGGATCAACTTTACCTTGTGTATGACTACATGCCTAATCTCAGCCTTGACCGGGTGCTGTTTCGCAAGAACTTGAAGGAGGAGCCACTTGGATGGGTGAGGCGTGGGAAAATAGTGAAGGGTTTGGCATGTGCATTGCACTATTTGCATGAGCAGTTGGAGACTCAAATCATTCACAGGGATGTGAAGACCAGCAATGTCATGCTTGATTCCCACTACAATGCTAGGTTGGGAGACTTTGGCTTGGCAAGGTGGCTGGAGCATGAGCTTGAGTATGAGTATGAGACAAGGAAAGCATCAGCATCAAGCAAGTTTGAGCATTTCAGGTTGAGTGAGACCACAAGGATTGGTGGCACAATTGGGTACTTGCCCCCTGAGAGCTTCCAGAGAAGGAGTATTGCTACCTCAAAATCTGATGTTTTCAGCTTTGGGATTGTTGTGTTGGAGGTGGTGTCTGGAAGGAGGGCCATTGATCTCACATACCCTGATGAGAAAATCATCTTGCTTGATTGGGTCAGAAGGCTTAGTGATGAAAGGAGGCTCGTTGATGCTGGGGACACTAGGCTGATGGACGGGTCCTACAAGGTTTTTGAGATGGAGCATTTGATTCACATAGGCCTCTTGTGCACACTCCATGACCCTCAGTTGAGGCCAAGCATGAAGTGGATTGTTGAAGCACTTTCTGACATGTCAAACAAGTTGCCGACACTCCCTTCATTTCACTCCCATCCTATGTACATCTCTTTGTCCTCCTCATCTGAGACTAGTCCAAGCAGCTCAAAAGGCACTGGCTCAGGCACAGCAACAGAAAGTTCCAGCAATCATACTAGTTCCATTTCCAAATATGTCACAGCCAGAGGAGATACCATATATGTAACTGCTGAAGCTGAACAGAGAAACGGTGGAACAAACTCTTCCAAGAGTAGCAAGAGAATGATGCATCAGCAGACATCATTTTCTGTGGTTCAAACACCTAGAGAGATACCATTCAAGGAGATTGTTTCAGCCACAGATAACTTCTCAGAGTCCAAAAGGGTTGCTGAGTTAGACTTTGGAACTGCTTACCATGGCATCCTAGATGGCCACTGCCATATCATGGTGAAACGCCTTGGCTTGAAGACATGCCCTGCGCTGCGCCAAAGATTTTCCAATGAGCTAAGAAACCTGGCAAAACTTCGCCACAGGAATTTGGTGCAGCTTAGAGGGTGGTGCACTGAGCAAGGAGAGATGCTTGTGGTGTATGATTACTCAGCTAGAAGATTTCTCAGTCACCAACTTTACCATCATAAAAAAGGTACCAAAAATGGTTATTCTGTCCTCAAATGGCATCATAGGTATAACATAGTGAAATCACTGGCATCTGCACTTCTCTATCTGCACGAGGAATGGGATGAACAGGTCATTCACAGGAACATAACCTCTTCAGCAGTGACTCTTGAACCTGACATGACCCCAAGACTAGGTAGTTTTGCTCTGGCTGAGTTTCTGTCAAGGAATGAGCATGGCCATCATGTGATCAACACCAGGAACAAGTCTGTTTGCGGGATTTACGGCTACATGTCCCCAGAATATGTAGAATCCGGAGAGGCAACTGTGGCTGCTGATGTTTATAGTTTTGGCGTGGTGGTGCTTGAGATTGTGAGTGGACTTAAGGCTGTGGATTTTAGGCAACCTGAGGTACTGTTGGTAAAGAAGGTTCATGAATTTGAGATGAGAAAAAGATCACTTGAGGCAGTAGCAGATATAGGACTAAATGGAGAGTACAATTACAAGGAGCTAATGAGATTAGTAAGGTTAGGAGTTGCATGCACCCGTTCTGACCCAAAACTAAGACCAAGCACAAGACAGATAGTGAGCATCCTTGATGGAAATGAGAAACTAATCATGGGGGAGAACATGGAGAGCAGGGAAGATTGGAGAGAAAGAAACGCTTGCTCTTTGTCACTGGTTAGGAGAATCCAAGCTCTAGGAATACAATGA 2550 0.4604 MQLTHLCLIMPSDYDKLEPLHATPPKHKGTEKKVKAKKDFQGACGGHVVATLQGSLTRLCGTKWWSCHWNLCQHGARESKQIKASSCVFHDMEGVQLSSKIGRDSNNPRIFSYAELYIGSRGFSEEEVLGSGGFGKVYKAVMPSDGTVVAVKCCLAGKGGQFEKTFAAELAAVAHLRHKNLVPLRGWCVFEDQLYLVYDYMPNLSLDRVLFRKNLKEEPLGWVRRGKIVKGLACALHYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGLARWLEHELEYEYETRKASASSKFEHFRLSETTRIGGTIGYLPPESFQRRSIATSKSDVFSFGIVVLEVVSGRRAIDLTYPDEKIILLDWVRRLSDERRLVDAGDTRLMDGSYKVFEMEHLIHIGLLCTLHDPQLRPSMKWIVEALSDMSNKLPTLPSFHSHPMYISLSSSSETSPSSSKGTGSGTATESSSNHTSSISKYVTARGDTIYVTAEAEQRNGGTNSSKSSKRMMHQQTSFSVVQTPREIPFKEIVSATDNFSESKRVAELDFGTAYHGILDGHCHIMVKRLGLKTCPALRQRFSNELRNLAKLRHRNLVQLRGWCTEQGEMLVVYDYSARRFLSHQLYHHKKGTKNGYSVLKWHHRYNIVKSLASALLYLHEEWDEQVIHRNITSSAVTLEPDMTPRLGSFALAEFLSRNEHGHHVINTRNKSVCGIYGYMSPEYVESGEATVAADVYSFGVVVLEIVSGLKAVDFRQPEVLLVKKVHEFEMRKRSLEAVADIGLNGEYNYKELMRLVRLGVACTRSDPKLRPSTRQIVSILDGNEKLIMGENMESREDWRERNACSLSLVRRIQALGIQ* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00847 849 FunFam Receptor like protein kinase S.2 95 200 - -
Lapu10g00847 849 Gene3D Transferase(Phosphotransferase) domain 1 612 834 - -
Lapu10g00847 849 Pfam Protein tyrosine and serine/threonine kinase 534 810 IPR001245 GO:0004672|GO:0006468
Lapu10g00847 849 PANTHER - 83 419 - -
Lapu10g00847 849 FunFam Receptor like protein kinase S.2 201 423 - -
Lapu10g00847 849 SUPERFAMILY Protein kinase-like (PK-like) 507 812 IPR011009 -
Lapu10g00847 849 SMART serkin_6 123 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00847 849 Gene3D Phosphorylase Kinase; domain 1 490 606 - -
Lapu10g00847 849 FunFam Receptor like protein kinase S.2 608 834 - -
Lapu10g00847 849 ProSiteProfiles Protein kinase domain profile. 123 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00847 849 MobiDBLite consensus disorder prediction 438 469 - -
Lapu10g00847 849 SUPERFAMILY Protein kinase-like (PK-like) 106 446 IPR011009 -
Lapu10g00847 849 FunFam Receptor like protein kinase S.2 490 606 - -
Lapu10g00847 849 Pfam Protein kinase domain 124 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00847 849 Gene3D Transferase(Phosphotransferase) domain 1 201 425 - -
Lapu10g00847 849 MobiDBLite consensus disorder prediction 486 505 - -
Lapu10g00847 849 Gene3D Phosphorylase Kinase; domain 1 95 200 - -
Lapu10g00847 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Lapu10g00847 849 ProSitePatterns Protein kinases ATP-binding region signature. 129 158 IPR017441 GO:0005524
Lapu10g00847 849 MobiDBLite consensus disorder prediction 483 505 - -
Lapu10g00847 849 ProSiteProfiles Protein kinase domain profile. 530 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00847 Lapu-Chr10 10231714 10234263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00847 514 817 Receptor kinase-like Gene Family AT5G59270 37.705 3.59e-56 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu10g00847 PK_Tyr_Ser-Thr 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00847 - - gmx:100781955 1508.81