Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu10g00846 | ATGTCCCTCAATCAATCAAAGGTGGAAAAGAACGACGTCGTTTACAGAAAAAACGGACGATCTTCCAGCCTTAACCAGCAAAGAGGTTCCCACGGCAAGGCTGGTGGCGATGGCGGTGGAATCACGCCGTCAAACAATTCATTATCCCCTGCCCGAAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGACAATCTAGACTAAATCCTTCCCCGGGAAATTCAACAGAGTCAAACAATGCATCTGCTGCCTCGATCATTAATAATGGTACCCATGTCCAGTCTCAATTACATGGTGCTTCAGATGGGCCAATTACAAAGTCATCTGAATCATCAGCTGGACATAAGAGCACTGAAAGTGTTCCAAAAGGTGCAACTACTGCATTGCCTCCCTTGATTTCTGATCCAGCCCCTCCCACAAGCCTTGCCAAGGGAGATGATGAGTCTAAGGCATTCCCTTTTCAATTTGGATCCATTGCTCCTAACTTTATTAATGGGATGGTTGTTCCTGCTCGTACAATTTCAGCTCCTCCTCATTTAGATAAGCAGAAGCCTGATCAGGATCTTAATGACTCTCACTCATCTGTGTCTTCGGTGCCAATTCCTCCTTTTCCAAAGCAGCAGAAACCACATGAGAAAGATGTTGGTGTCAATGAGCAATCTAATGTCAAAGAGATTAAGGCAAACAAAGATTCTCAGGTGTCAGTTTTAAACTCAGTAAATCAGATGTCAAAGCCCTTTGTTGCTTCTATAACTGGGATTTCAATGTCACCTTCATATCACCAATCACAGGCTCCTTTACAATTTGGAGGTGCTAATCCACAGATTCAATCTCAGGGCATGACAACAAAGTCCCTCCAAATGCCTATACCGATGCCTTTACCAATAGGTAATGCTACACAAGGGCCACAGCCAGTTTTTATTCCAGGTCTTCAACCTCATCCAATACATCCTCAAGGGATCATGCATCAAGGCCAGAACATTAGTTTTTCTCCTCAAATGGGTAATCAATTAGGCAACATGGGCATTGGCATAGGTCATCAATATCCCCAACAGCAAGGAGGAAAATTTGCTAGTCCTCGAAAAACTACACATGTAAAGATAACTCATCCTGAGACACATGAAGAGTTAAGACTTGATAAAAGGAGGGATGCATATTCAAATGGTGGATCGTCCGGTGCAAGGTCACATCCTAACATACCTTCTCAATCCCAACCTGTTCAATCTTTTCCAGGTTCTCATCCTGTGAACTATTTTTCATCCAACTCTCCCTATTATCCACCTAATTCTCTCCCATTAACAAGTAGCCCAAACCCAATAACTCCTAATTCTCAACCACCAATATTTAATTTTACTCTGAACCATGCTCCCCAAGGAGCGATTTTTATGAATTCATCATCACAATGTTCCTTGCCTACTAATAAAACTAGCACTCCTACAGGGATTACATCTGTGACCATTAAGCCTAATGGTACAACTACTATAGTGGACTCATCATCGTCCAATTCTAGTATTTCTGATGTTCAAAATGGAGAATCTCCTAGTTCAACAATATCTTGTGATGTTAGCTCCTCTGTCCTGCAGAAAGGATTGGAAACCTGTTCAGATGTTTCTCTACAACAGTCTAAGTTTTCTACTGATGTTGTCGCAGCTGTGTCCAATAATGAAGGTGGAAGGGAATCTCTTAGTATCTCGAACTCTTTGAAAGATAAGAAACCAGGGGGAAAAGATCAATTATCACAATATCAGGTTTCTGTACCGTCTCCCACAATGGATAATATGCCTTCTCCAGTTGTTGCTCATGATATATCTGATATTGGAGTTCCCGATGCTATAGGAACTAAAAAAAATCATTCTGCAACAATTACTAATGAAGATCTTCCAAGATCCGATACAATTTCTACTCCTGTTGAAGTGGAGACCAATGGGTCTATAGAAGCTTCTGTTCATGCTTCAATAGAAGGATGTGGTGCACAAACAATTGACAAAGTTCACAATCAGATGCCTGATACGACATATAAATTAGTTGAAGATCTGCAGTCTATTGATCTTCCAAAAACAACACTAGAGCATGTTAAGAATGATTCAGAGAATGTTGATGGTGAGTCAGGTACCAAGGATAGACCAATTATAGAACCAAATAAGGTGAAAAATACATCTAAAGGGAAGAAGAAAAGAAGAGAGATACTTCAGAAAGCAGATGCCGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCCGGGGAAAAGAAAGAAGATGTCTTAAGTTCTGAGAGCAAGGAAGGTGCCACTACTTCTCCAAGTTTGAAACAATTTGATGGTCAGTCAGATATTATAGCTCGTGAAAAATGTGATCCTAATAAAGTTGAACTTGATAACTGGGAGGATGTTGCTGACATGTCTACCCCTAAACTAGAGGTTCATGATGAATCTCAAAAAGTTGGTGATGGACAAGGGAGTACAACCAAAAAATATTCTCGTGATTTCCTTCTGAGATTTGTAGAGCAGTGCATTGATCTTCCTGAAGGTTTTGAAATCACTACAGACATTGGAGCTTTGATGAATGCCAATATTGGTAGCTCTTATATTTTTGAGCGTAATTCACATCCTAGTCCTGGAAGAATTGTAGATAGACCAGGTGGGATGTCTCGAATGGATCGTCGTGGGGATGTGGTTATGGAGGATGATAGATGGAATAAAGTTTCTGGTTCTTTTCGTTCTGGACGTGGTCCGGAAGGCGTTGGAGGTAATTCAGGATTTCGATTTGGTCAAGGAGGCAATTTTGGTGTTTTAAGGAACCCTCGTGCACAAACACCACTACAATATGGTGGAGGGATCCTTTCTGGGCCAATGCAATCTGGGGGAAATCAAGGCGAAAGAAATAACCCTAATAGGGAGAGATGGCAGCGATCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCCACCCAAACTCCTTTACAGATAATGCACAAAGCCGAGAATAAGTATGAAGTAGGTAAAGTGACCGATGTGGAAGGGGTAAAACAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACACCACAAAATTTTGATAAACTCTTTGAACAAGTGAAAGAAGTTAATATTGACAATGCAATCACCCTCATTGGTGTCATCTCACAAATATTTGAGAAAGCTCTTATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAAATAACTTTTAAAAGGTTATTATTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCGGTCTGCTGAGGAAAGGGAAGAAAGAAGAGTTAAGGCAAGAAGACGCATGTTGGGAAATATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATCAAGATCCGGATGAAGAAAACATTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCAAAAAAGATTGAGGAGGTACATAGGGATGCTGCTCAGGAAAGGCAATCCATAACTGGTAGATCGAGTCGTGGTCCTGGTAACAATCAATCAACAAGAAGGAATCCCATTGATTTTGGTCCAAGAGTATCATCTGTGTTGCCATCTTCTAATTCTCAAATGGGTGGATTATGTGGTCTTCCAACTCAAGCTCGTGGGTATGGGGGCTCTCAGGATGCTCGATCTGAGGAACAACAATCTTATGAAGCTAAGACCTTGTCAGTTCCTTTGCCTCAAAGATCTTTAGGTGATGATTCTATAACCTTGGTACCTCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATCAACCACAATTTCCAATTTTCCAACATCTGATGTGGCTCCTGTACCTAGAGACTCTCATAGAAGGACTACAGTTCTTAATGGTCAGAGTAATTCATCAGAGCGCACACAATACAACTCAAGTGAGGATATTGGGTCAAGATATGGTACTAACAGGTCTTTAGGTCCATCTACTAATGATCAATCAATTGCTCTAGAACATAATATGAACCATGGTAACAGAAACTTGAGAAGTGTTTCACCTCCTGCTCAATTGCACGGGTCGATAGTCTCTCAGAATGCTCATTCAGAGAAGATTTTGTCGGAAGAACAACTGAGAGACATGTCCTTGTCTGCCATAAGAGAATACTACAGTGCCAGAGATGAGAATGAACTTGCTTTGTGTGTCAAAGATTTGAACTCTCCAAGCTTCCATCCTTCTATGGTTTCTCTCTGGGTCACAGACTCATTTGAGAGAAAGGACATAGAAAGAGATCTTTTGGCCAAACTACTTATCAACCTTGTGAAATCTCAACATCACACCTTGAGTCAAGTCCAACTCATGAAAGGGTTTGAATCTGTTCTGTGTACATTGGAGGATGTCGTTAATGATGCCCCTAGAGCAGCAGAGTTTCTTGGCCGAATTTTTGCTAAACTCATAACAGAGAGAGTAGCTACTTTTGATGAGATTGCACAATTAATACATGACGGTGGAGAAGAACCAGGTAGTCTTTTAGAAACTGGACTTGCAGGTGATGTTCTTGGAAGCATGTTGGAGGTAATTCAAATCGAAAAGGGAGACACTGTTCTAAATGAGATCCTTTCAAGAACCTCTAATTTCCAATTGAAAACTTTCCAACCACCTAATGGTAAAATATCAAGGAAGTTGGAAAAATTTATTTAG | 4962 | 0.4055 | MSLNQSKVEKNDVVYRKNGRSSSLNQQRGSHGKAGGDGGGITPSNNSLSPARSFNKKSNNAQGGQSRLNPSPGNSTESNNASAASIINNGTHVQSQLHGASDGPITKSSESSAGHKSTESVPKGATTALPPLISDPAPPTSLAKGDDESKAFPFQFGSIAPNFINGMVVPARTISAPPHLDKQKPDQDLNDSHSSVSSVPIPPFPKQQKPHEKDVGVNEQSNVKEIKANKDSQVSVLNSVNQMSKPFVASITGISMSPSYHQSQAPLQFGGANPQIQSQGMTTKSLQMPIPMPLPIGNATQGPQPVFIPGLQPHPIHPQGIMHQGQNISFSPQMGNQLGNMGIGIGHQYPQQQGGKFASPRKTTHVKITHPETHEELRLDKRRDAYSNGGSSGARSHPNIPSQSQPVQSFPGSHPVNYFSSNSPYYPPNSLPLTSSPNPITPNSQPPIFNFTLNHAPQGAIFMNSSSQCSLPTNKTSTPTGITSVTIKPNGTTTIVDSSSSNSSISDVQNGESPSSTISCDVSSSVLQKGLETCSDVSLQQSKFSTDVVAAVSNNEGGRESLSISNSLKDKKPGGKDQLSQYQVSVPSPTMDNMPSPVVAHDISDIGVPDAIGTKKNHSATITNEDLPRSDTISTPVEVETNGSIEASVHASIEGCGAQTIDKVHNQMPDTTYKLVEDLQSIDLPKTTLEHVKNDSENVDGESGTKDRPIIEPNKVKNTSKGKKKRREILQKADAAGSTSDLYNAYKGPGEKKEDVLSSESKEGATTSPSLKQFDGQSDIIAREKCDPNKVELDNWEDVADMSTPKLEVHDESQKVGDGQGSTTKKYSRDFLLRFVEQCIDLPEGFEITTDIGALMNANIGSSYIFERNSHPSPGRIVDRPGGMSRMDRRGDVVMEDDRWNKVSGSFRSGRGPEGVGGNSGFRFGQGGNFGVLRNPRAQTPLQYGGGILSGPMQSGGNQGERNNPNRERWQRSASFQQRGLIPSPTQTPLQIMHKAENKYEVGKVTDVEGVKQRQLKAILNKLTPQNFDKLFEQVKEVNIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKRSAEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQSITGRSSRGPGNNQSTRRNPIDFGPRVSSVLPSSNSQMGGLCGLPTQARGYGGSQDARSEEQQSYEAKTLSVPLPQRSLGDDSITLVPQGGLARGMSMRGSTTISNFPTSDVAPVPRDSHRRTTVLNGQSNSSERTQYNSSEDIGSRYGTNRSLGPSTNDQSIALEHNMNHGNRNLRSVSPPAQLHGSIVSQNAHSEKILSEEQLRDMSLSAIREYYSARDENELALCVKDLNSPSFHPSMVSLWVTDSFERKDIERDLLAKLLINLVKSQHHTLSQVQLMKGFESVLCTLEDVVNDAPRAAEFLGRIFAKLITERVATFDEIAQLIHDGGEEPGSLLETGLAGDVLGSMLEVIQIEKGDTVLNEILSRTSNFQLKTFQPPNGKISRKLEKFI* | 1654 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 365 | 385 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 1105 | 1130 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 1 | 148 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 1312 | 1328 | - | - | |
Lapu10g00846 | 1653 | SUPERFAMILY | ARM repeat | 1460 | 1651 | IPR016024 | - | |
Lapu10g00846 | 1653 | SUPERFAMILY | ARM repeat | 1012 | 1237 | IPR016024 | - | |
Lapu10g00846 | 1653 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 328 | 1652 | IPR045208 | GO:0003743 | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 40 | 124 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 690 | 718 | - | - | |
Lapu10g00846 | 1653 | FunFam | Eukaryotic translation initiation factor 4G | 1013 | 1248 | - | - | |
Lapu10g00846 | 1653 | Gene3D | - | 1013 | 1248 | - | - | |
Lapu10g00846 | 1653 | SMART | ma3_7 | 1465 | 1579 | IPR003891 | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 952 | 967 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 349 | 416 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 761 | 775 | - | - | |
Lapu10g00846 | 1653 | SMART | if4_15 | 1013 | 1235 | IPR003890 | GO:0003723|GO:0005515 | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 941 | 967 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 1357 | 1421 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 1357 | 1372 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 389 | 416 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 176 | 217 | - | - | |
Lapu10g00846 | 1653 | Gene3D | - | 1455 | 1653 | - | - | |
Lapu10g00846 | 1653 | Pfam | MA3 domain | 1470 | 1575 | IPR003891 | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 493 | 516 | - | - | |
Lapu10g00846 | 1653 | Pfam | MIF4G domain | 1013 | 1235 | IPR003890 | GO:0003723|GO:0005515 | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 1235 | 1328 | - | - | |
Lapu10g00846 | 1653 | ProSiteProfiles | MI domain profile. | 1464 | 1588 | IPR003891 | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 1260 | 1302 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 1235 | 1259 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 557 | 580 | - | - | |
Lapu10g00846 | 1653 | Coils | Coil | 1095 | 1127 | - | - | |
Lapu10g00846 | 1653 | FunFam | Eukaryotic translation initiation factor 4G | 1458 | 1652 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 1382 | 1421 | - | - | |
Lapu10g00846 | 1653 | MobiDBLite | consensus disorder prediction | 690 | 779 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu10g00846 | Lapu-Chr10 | 10219382 | 10229850 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu10g00846 | 1 | 1652 | Eukaryotic Initiation Factors Gene Family | AT3G60240 | 44.705 | 0.0 | 1201 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu10g00846 | K03260 | - | gmx:100798562 | 2340.84 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lapu10g00846 | 10 | 10219382 | 10229850 | Lapu10g00846 | 10 | 10219382 | 10229850 | ECH |