Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00846 ATGTCCCTCAATCAATCAAAGGTGGAAAAGAACGACGTCGTTTACAGAAAAAACGGACGATCTTCCAGCCTTAACCAGCAAAGAGGTTCCCACGGCAAGGCTGGTGGCGATGGCGGTGGAATCACGCCGTCAAACAATTCATTATCCCCTGCCCGAAGTTTTAACAAGAAGTCTAATAATGCACAAGGTGGACAATCTAGACTAAATCCTTCCCCGGGAAATTCAACAGAGTCAAACAATGCATCTGCTGCCTCGATCATTAATAATGGTACCCATGTCCAGTCTCAATTACATGGTGCTTCAGATGGGCCAATTACAAAGTCATCTGAATCATCAGCTGGACATAAGAGCACTGAAAGTGTTCCAAAAGGTGCAACTACTGCATTGCCTCCCTTGATTTCTGATCCAGCCCCTCCCACAAGCCTTGCCAAGGGAGATGATGAGTCTAAGGCATTCCCTTTTCAATTTGGATCCATTGCTCCTAACTTTATTAATGGGATGGTTGTTCCTGCTCGTACAATTTCAGCTCCTCCTCATTTAGATAAGCAGAAGCCTGATCAGGATCTTAATGACTCTCACTCATCTGTGTCTTCGGTGCCAATTCCTCCTTTTCCAAAGCAGCAGAAACCACATGAGAAAGATGTTGGTGTCAATGAGCAATCTAATGTCAAAGAGATTAAGGCAAACAAAGATTCTCAGGTGTCAGTTTTAAACTCAGTAAATCAGATGTCAAAGCCCTTTGTTGCTTCTATAACTGGGATTTCAATGTCACCTTCATATCACCAATCACAGGCTCCTTTACAATTTGGAGGTGCTAATCCACAGATTCAATCTCAGGGCATGACAACAAAGTCCCTCCAAATGCCTATACCGATGCCTTTACCAATAGGTAATGCTACACAAGGGCCACAGCCAGTTTTTATTCCAGGTCTTCAACCTCATCCAATACATCCTCAAGGGATCATGCATCAAGGCCAGAACATTAGTTTTTCTCCTCAAATGGGTAATCAATTAGGCAACATGGGCATTGGCATAGGTCATCAATATCCCCAACAGCAAGGAGGAAAATTTGCTAGTCCTCGAAAAACTACACATGTAAAGATAACTCATCCTGAGACACATGAAGAGTTAAGACTTGATAAAAGGAGGGATGCATATTCAAATGGTGGATCGTCCGGTGCAAGGTCACATCCTAACATACCTTCTCAATCCCAACCTGTTCAATCTTTTCCAGGTTCTCATCCTGTGAACTATTTTTCATCCAACTCTCCCTATTATCCACCTAATTCTCTCCCATTAACAAGTAGCCCAAACCCAATAACTCCTAATTCTCAACCACCAATATTTAATTTTACTCTGAACCATGCTCCCCAAGGAGCGATTTTTATGAATTCATCATCACAATGTTCCTTGCCTACTAATAAAACTAGCACTCCTACAGGGATTACATCTGTGACCATTAAGCCTAATGGTACAACTACTATAGTGGACTCATCATCGTCCAATTCTAGTATTTCTGATGTTCAAAATGGAGAATCTCCTAGTTCAACAATATCTTGTGATGTTAGCTCCTCTGTCCTGCAGAAAGGATTGGAAACCTGTTCAGATGTTTCTCTACAACAGTCTAAGTTTTCTACTGATGTTGTCGCAGCTGTGTCCAATAATGAAGGTGGAAGGGAATCTCTTAGTATCTCGAACTCTTTGAAAGATAAGAAACCAGGGGGAAAAGATCAATTATCACAATATCAGGTTTCTGTACCGTCTCCCACAATGGATAATATGCCTTCTCCAGTTGTTGCTCATGATATATCTGATATTGGAGTTCCCGATGCTATAGGAACTAAAAAAAATCATTCTGCAACAATTACTAATGAAGATCTTCCAAGATCCGATACAATTTCTACTCCTGTTGAAGTGGAGACCAATGGGTCTATAGAAGCTTCTGTTCATGCTTCAATAGAAGGATGTGGTGCACAAACAATTGACAAAGTTCACAATCAGATGCCTGATACGACATATAAATTAGTTGAAGATCTGCAGTCTATTGATCTTCCAAAAACAACACTAGAGCATGTTAAGAATGATTCAGAGAATGTTGATGGTGAGTCAGGTACCAAGGATAGACCAATTATAGAACCAAATAAGGTGAAAAATACATCTAAAGGGAAGAAGAAAAGAAGAGAGATACTTCAGAAAGCAGATGCCGCTGGGTCAACTTCTGATCTTTATAATGCATACAAGGGACCCGGGGAAAAGAAAGAAGATGTCTTAAGTTCTGAGAGCAAGGAAGGTGCCACTACTTCTCCAAGTTTGAAACAATTTGATGGTCAGTCAGATATTATAGCTCGTGAAAAATGTGATCCTAATAAAGTTGAACTTGATAACTGGGAGGATGTTGCTGACATGTCTACCCCTAAACTAGAGGTTCATGATGAATCTCAAAAAGTTGGTGATGGACAAGGGAGTACAACCAAAAAATATTCTCGTGATTTCCTTCTGAGATTTGTAGAGCAGTGCATTGATCTTCCTGAAGGTTTTGAAATCACTACAGACATTGGAGCTTTGATGAATGCCAATATTGGTAGCTCTTATATTTTTGAGCGTAATTCACATCCTAGTCCTGGAAGAATTGTAGATAGACCAGGTGGGATGTCTCGAATGGATCGTCGTGGGGATGTGGTTATGGAGGATGATAGATGGAATAAAGTTTCTGGTTCTTTTCGTTCTGGACGTGGTCCGGAAGGCGTTGGAGGTAATTCAGGATTTCGATTTGGTCAAGGAGGCAATTTTGGTGTTTTAAGGAACCCTCGTGCACAAACACCACTACAATATGGTGGAGGGATCCTTTCTGGGCCAATGCAATCTGGGGGAAATCAAGGCGAAAGAAATAACCCTAATAGGGAGAGATGGCAGCGATCTGCTAGCTTCCAGCAGAGGGGTTTAATTCCTTCTCCCACCCAAACTCCTTTACAGATAATGCACAAAGCCGAGAATAAGTATGAAGTAGGTAAAGTGACCGATGTGGAAGGGGTAAAACAGAGGCAGTTGAAAGCTATCTTGAACAAACTAACACCACAAAATTTTGATAAACTCTTTGAACAAGTGAAAGAAGTTAATATTGACAATGCAATCACCCTCATTGGTGTCATCTCACAAATATTTGAGAAAGCTCTTATGGAACCTACCTTTTGTGAAATGTATGCCAACTTTTGTTTACATTTGGCTTCTGAGTTGCCTGATTTTAGTGAGGACAATGAAAAAATAACTTTTAAAAGGTTATTATTAAACAAGTGCCAAGAGGAATTTGAGAGGGGTGAAAGAGAAGAAGAAGAAGCAAATAAGGCTGATGAGGGTGAGGTTAAGCGGTCTGCTGAGGAAAGGGAAGAAAGAAGAGTTAAGGCAAGAAGACGCATGTTGGGAAATATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATGAGTGTATCAAGAAGTTACTGGGTCAATATCAAGATCCGGATGAAGAAAACATTGAAGCTTTGTGCAAGCTAATGAGTACTATTGGGGAGATGATTGACCATCCAAAAGCCAAGGAACATATGGATGCATATTTTGAAAGGATGAAATTATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGCCATTGATTTGAGAAAGAATAAATGGCAACAAAGGAGGAAAGTTGAAGGTCCAAAAAAGATTGAGGAGGTACATAGGGATGCTGCTCAGGAAAGGCAATCCATAACTGGTAGATCGAGTCGTGGTCCTGGTAACAATCAATCAACAAGAAGGAATCCCATTGATTTTGGTCCAAGAGTATCATCTGTGTTGCCATCTTCTAATTCTCAAATGGGTGGATTATGTGGTCTTCCAACTCAAGCTCGTGGGTATGGGGGCTCTCAGGATGCTCGATCTGAGGAACAACAATCTTATGAAGCTAAGACCTTGTCAGTTCCTTTGCCTCAAAGATCTTTAGGTGATGATTCTATAACCTTGGTACCTCAAGGTGGTCTTGCTAGGGGAATGTCTATGAGAGGATCAACCACAATTTCCAATTTTCCAACATCTGATGTGGCTCCTGTACCTAGAGACTCTCATAGAAGGACTACAGTTCTTAATGGTCAGAGTAATTCATCAGAGCGCACACAATACAACTCAAGTGAGGATATTGGGTCAAGATATGGTACTAACAGGTCTTTAGGTCCATCTACTAATGATCAATCAATTGCTCTAGAACATAATATGAACCATGGTAACAGAAACTTGAGAAGTGTTTCACCTCCTGCTCAATTGCACGGGTCGATAGTCTCTCAGAATGCTCATTCAGAGAAGATTTTGTCGGAAGAACAACTGAGAGACATGTCCTTGTCTGCCATAAGAGAATACTACAGTGCCAGAGATGAGAATGAACTTGCTTTGTGTGTCAAAGATTTGAACTCTCCAAGCTTCCATCCTTCTATGGTTTCTCTCTGGGTCACAGACTCATTTGAGAGAAAGGACATAGAAAGAGATCTTTTGGCCAAACTACTTATCAACCTTGTGAAATCTCAACATCACACCTTGAGTCAAGTCCAACTCATGAAAGGGTTTGAATCTGTTCTGTGTACATTGGAGGATGTCGTTAATGATGCCCCTAGAGCAGCAGAGTTTCTTGGCCGAATTTTTGCTAAACTCATAACAGAGAGAGTAGCTACTTTTGATGAGATTGCACAATTAATACATGACGGTGGAGAAGAACCAGGTAGTCTTTTAGAAACTGGACTTGCAGGTGATGTTCTTGGAAGCATGTTGGAGGTAATTCAAATCGAAAAGGGAGACACTGTTCTAAATGAGATCCTTTCAAGAACCTCTAATTTCCAATTGAAAACTTTCCAACCACCTAATGGTAAAATATCAAGGAAGTTGGAAAAATTTATTTAG 4962 0.4055 MSLNQSKVEKNDVVYRKNGRSSSLNQQRGSHGKAGGDGGGITPSNNSLSPARSFNKKSNNAQGGQSRLNPSPGNSTESNNASAASIINNGTHVQSQLHGASDGPITKSSESSAGHKSTESVPKGATTALPPLISDPAPPTSLAKGDDESKAFPFQFGSIAPNFINGMVVPARTISAPPHLDKQKPDQDLNDSHSSVSSVPIPPFPKQQKPHEKDVGVNEQSNVKEIKANKDSQVSVLNSVNQMSKPFVASITGISMSPSYHQSQAPLQFGGANPQIQSQGMTTKSLQMPIPMPLPIGNATQGPQPVFIPGLQPHPIHPQGIMHQGQNISFSPQMGNQLGNMGIGIGHQYPQQQGGKFASPRKTTHVKITHPETHEELRLDKRRDAYSNGGSSGARSHPNIPSQSQPVQSFPGSHPVNYFSSNSPYYPPNSLPLTSSPNPITPNSQPPIFNFTLNHAPQGAIFMNSSSQCSLPTNKTSTPTGITSVTIKPNGTTTIVDSSSSNSSISDVQNGESPSSTISCDVSSSVLQKGLETCSDVSLQQSKFSTDVVAAVSNNEGGRESLSISNSLKDKKPGGKDQLSQYQVSVPSPTMDNMPSPVVAHDISDIGVPDAIGTKKNHSATITNEDLPRSDTISTPVEVETNGSIEASVHASIEGCGAQTIDKVHNQMPDTTYKLVEDLQSIDLPKTTLEHVKNDSENVDGESGTKDRPIIEPNKVKNTSKGKKKRREILQKADAAGSTSDLYNAYKGPGEKKEDVLSSESKEGATTSPSLKQFDGQSDIIAREKCDPNKVELDNWEDVADMSTPKLEVHDESQKVGDGQGSTTKKYSRDFLLRFVEQCIDLPEGFEITTDIGALMNANIGSSYIFERNSHPSPGRIVDRPGGMSRMDRRGDVVMEDDRWNKVSGSFRSGRGPEGVGGNSGFRFGQGGNFGVLRNPRAQTPLQYGGGILSGPMQSGGNQGERNNPNRERWQRSASFQQRGLIPSPTQTPLQIMHKAENKYEVGKVTDVEGVKQRQLKAILNKLTPQNFDKLFEQVKEVNIDNAITLIGVISQIFEKALMEPTFCEMYANFCLHLASELPDFSEDNEKITFKRLLLNKCQEEFERGEREEEEANKADEGEVKRSAEEREERRVKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEENIEALCKLMSTIGEMIDHPKAKEHMDAYFERMKLLSNNMNLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQSITGRSSRGPGNNQSTRRNPIDFGPRVSSVLPSSNSQMGGLCGLPTQARGYGGSQDARSEEQQSYEAKTLSVPLPQRSLGDDSITLVPQGGLARGMSMRGSTTISNFPTSDVAPVPRDSHRRTTVLNGQSNSSERTQYNSSEDIGSRYGTNRSLGPSTNDQSIALEHNMNHGNRNLRSVSPPAQLHGSIVSQNAHSEKILSEEQLRDMSLSAIREYYSARDENELALCVKDLNSPSFHPSMVSLWVTDSFERKDIERDLLAKLLINLVKSQHHTLSQVQLMKGFESVLCTLEDVVNDAPRAAEFLGRIFAKLITERVATFDEIAQLIHDGGEEPGSLLETGLAGDVLGSMLEVIQIEKGDTVLNEILSRTSNFQLKTFQPPNGKISRKLEKFI* 1654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 365 385 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 1105 1130 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 1 148 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 1312 1328 - -
Lapu10g00846 1653 SUPERFAMILY ARM repeat 1460 1651 IPR016024 -
Lapu10g00846 1653 SUPERFAMILY ARM repeat 1012 1237 IPR016024 -
Lapu10g00846 1653 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 328 1652 IPR045208 GO:0003743
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 40 124 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 690 718 - -
Lapu10g00846 1653 FunFam Eukaryotic translation initiation factor 4G 1013 1248 - -
Lapu10g00846 1653 Gene3D - 1013 1248 - -
Lapu10g00846 1653 SMART ma3_7 1465 1579 IPR003891 -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 952 967 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 349 416 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 761 775 - -
Lapu10g00846 1653 SMART if4_15 1013 1235 IPR003890 GO:0003723|GO:0005515
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 941 967 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 1357 1421 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 1357 1372 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 389 416 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 176 217 - -
Lapu10g00846 1653 Gene3D - 1455 1653 - -
Lapu10g00846 1653 Pfam MA3 domain 1470 1575 IPR003891 -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 493 516 - -
Lapu10g00846 1653 Pfam MIF4G domain 1013 1235 IPR003890 GO:0003723|GO:0005515
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 1235 1328 - -
Lapu10g00846 1653 ProSiteProfiles MI domain profile. 1464 1588 IPR003891 -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 1260 1302 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 1235 1259 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 557 580 - -
Lapu10g00846 1653 Coils Coil 1095 1127 - -
Lapu10g00846 1653 FunFam Eukaryotic translation initiation factor 4G 1458 1652 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 1382 1421 - -
Lapu10g00846 1653 MobiDBLite consensus disorder prediction 690 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00846 Lapu-Chr10 10219382 10229850 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00846 1 1652 Eukaryotic Initiation Factors Gene Family AT3G60240 44.705 0.0 1201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00846 K03260 - gmx:100798562 2340.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00846 10 10219382 10229850 Lapu10g00846 10 10219382 10229850 ECH