Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00842 ATGGTGTCAGATATAGAGATGGTGAAGGAAGTCATCATGTACACCTCTTTGAATCTAGGAAAGCCCACTTATCTGTCCAAAGATATGGGACCACTTTTGGGCAAAGGCATAGTGACATCAAGTGGTCCAATTTGGGCTCACCAGAAGAAGATAATTGCCCCTGAACTATACCTCGATAAAGTGAAGGCAATGGTTAATCTGATAGTGGAATCAACAAATACAACACTAAAGTCTTGGGAGGGTAGACTTGAAAGTGGGGGAGCAGGATCAGAGATTAAAGTTGACGAAGATCTTCGAAGTTTGTCAGCTGACATAATTGCCAGAGCTTGTTTTGGGAGCAATTACGTTGAAGGAAAAGAAATATTCTCAAAGCTTAGAGATCTTCAAACGCTCTTGTCCAAGATTTATACTGGAATTCCAGGCTTTCGATACTTGCCAAACAAAATCAACAGACAAATGTGGAGATTGGAGAAACAAATAGATTCAAAGATATCAAACCTCATAAAACAACGCCTGGAGGAAACTCATGAGCAAGATCTTCTCCAGATGATACTCGAGGGTGCAAAGAACAGCGAGGGTGGTAATGACCTCATATCAGGTTCCATCTCATGTGACAGGTTTATGATAGATAACTGCAAAAATATATTCTTTGCTGGACATGAGACTACTGCCATCACAGCATCATGGTGCTTAATGCTGTTAGCTGTGCATCAAGATTGGCAAGACCGTGCCCGGGCTGAGGTGCTTGAAGTTTGTGGAAAAGGTGCTCCAGATGCAAACATGCTTAGAAGCTTGAAAACGTTAACCATGGTGATTCAAGAGACTTTGAGGTTGTATCCACCAGCAGCATTTGTTGTTAGAACGGCTCTCCGAGATGTCAATCTAAAAGGGTTCCTAATTCCAAAAGGAATGAACATTCAGATTCCACTCTCAGTGCTGCAGCATGACCCTCAACTCTGGGGTCCTGATGCTCACAAGTTCAATCCAGAAAGATTTGCAAATGGGGTGCTTGGAGCATGCAAGGTTCCACAAGCTTATATGCCATTTGGAATAGGGTCACGAGTGTGTGTTGGACAGCACTTAGCCATGACAGAACTGAAGGTGATTTTGTCTCTAATTCTGTTGAAGTTTCACTTCTCTCTCTCACCAAGTTACTGCCATTCACCTGCCTTTCGTTTGGTTATAGAACCTGGCCAGGGAGTTGTTCTTGAGATGACAAGAATTTGA 1227 0.4271 MVSDIEMVKEVIMYTSLNLGKPTYLSKDMGPLLGKGIVTSSGPIWAHQKKIIAPELYLDKVKAMVNLIVESTNTTLKSWEGRLESGGAGSEIKVDEDLRSLSADIIARACFGSNYVEGKEIFSKLRDLQTLLSKIYTGIPGFRYLPNKINRQMWRLEKQIDSKISNLIKQRLEETHEQDLLQMILEGAKNSEGGNDLISGSISCDRFMIDNCKNIFFAGHETTAITASWCLMLLAVHQDWQDRARAEVLEVCGKGAPDANMLRSLKTLTMVIQETLRLYPPAAFVVRTALRDVNLKGFLIPKGMNIQIPLSVLQHDPQLWGPDAHKFNPERFANGVLGACKVPQAYMPFGIGSRVCVGQHLAMTELKVILSLILLKFHFSLSPSYCHSPAFRLVIEPGQGVVLEMTRI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00842 408 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g00842 408 PRINTS P450 superfamily signature 218 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g00842 408 PRINTS P450 superfamily signature 270 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g00842 408 PRINTS P450 superfamily signature 347 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g00842 408 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 399 - -
Lapu10g00842 408 SUPERFAMILY Cytochrome P450 1 404 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g00842 408 Gene3D Cytochrome P450 1 407 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g00842 408 Pfam Cytochrome P450 2 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g00842 408 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 349 358 IPR017972 GO:0005506|GO:0016705
Lapu10g00842 408 PRINTS E-class P450 group I signature 227 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g00842 408 PRINTS E-class P450 group I signature 346 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g00842 408 PRINTS E-class P450 group I signature 356 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g00842 408 PRINTS E-class P450 group I signature 101 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g00842 408 PRINTS E-class P450 group I signature 207 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu10g00842 408 PRINTS E-class P450 group I signature 269 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00842 Lapu-Chr10 10207178 10210901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00842 7 405 Cytochrome P450 AT5G24900 47.922 6.53e-139 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00842 K24544 - gmx:100780335 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00842 10 10207178 10210901 Lapu10g00842 10 10207178 10210901 ECH