Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00832 ATGGAAGGAGAGAGAGGTGTTAATCACAACTATGACCTTCAAGTTTCATTCACCAACACCCCTCAAGCAATCCATGAAATGGGTTTTGTCCAATTTGAAGAAAATCAGGTTCTTAGCTTCTTGGCACCCTCTGCTCAATCTCAGTCTTCTCAGCTCTCTCAGTCCCTAAACGTTGACGGCGGCGACAATACTATCACCGCGGCCGCCGTTACTACCACTGTCACTACCACCACCACTTCTGGATCGGTTGCAACAATTGGTTTTAACCATAATGACCTTGTTTCAAGAACTTCTTGGAATAATGAACAGGTGAGAACACTGGATCCTAATAATAAAGCTGTCAATGATGAAAATTGCACCGGAAATACTAGTGATGGCAACAACACATGGTGGAGAAGTTCAGGGTCAGAGAAGAACAAGGTGAAAGTGAGGAGGAAGCTGAGAGAACCACGGTTTTGTTTCCAGACAAGAAGTGATGTAGATGTTCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTGAAGAATAGCCTTCATCCAAGAAGTTATTACCGTTGTACACATAACAACTGTAGAGTGAAGAAAAGAGTTGAAAGACTCTCAGAAGATTGTCGAATGGTAATAACCACTTATGAAGGAAGACACAACCATTCTCCCTGTGATGACTCAAATTCATCAGAACATGAATGTTTCACTTCTTTTTGA 714 0.4174 MEGERGVNHNYDLQVSFTNTPQAIHEMGFVQFEENQVLSFLAPSAQSQSSQLSQSLNVDGGDNTITAAAVTTTVTTTTTSGSVATIGFNHNDLVSRTSWNNEQVRTLDPNNKAVNDENCTGNTSDGNNTWWRSSGSEKNKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFTSF* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00832 237 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 62 224 IPR044810 GO:0003700
Lapu10g00832 237 SUPERFAMILY WRKY DNA-binding domain 155 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu10g00832 237 Pfam WRKY DNA -binding domain 164 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu10g00832 237 Gene3D WRKY domain 150 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu10g00832 237 ProSiteProfiles WRKY domain profile. 158 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu10g00832 237 SMART WRKY_cls 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu10g00832 237 FunFam WRKY transcription factor 57 149 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00832 Lapu-Chr10 10089452 10096216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00832 3 237 WRKY Transcription Factor Family AT2G44745 54.918 1.15e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu10g00832 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00832 - - var:108347245 401.749