Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00822 ATGGCTGAATCCGAATTCGAACTTGATCTTGAAGAGAAATCGTGGCACCTCCTTGCGCTCCTCCTCCGAATTGGCCAGGCCGTCTATCCGCAGCGTCTGGCGGCAGAGTGCCGTTTATTCGCTGCCTCGCCAGACTTTGTCTGCTATGTTAGCTCTCTCCCTCGTTCACCTCTCTCTGTTACTGACAATGGACTCGTCACTCCCTCTGTTAGTGCCGTTTTTGCCCTCGGAAATTTTTTCTCTCTCCGATTCTCTCTCGAATCGCAATCACACCGTTTCAGGAAACGCAAGTTGCTCTTTGACTCTGCTGAAGATGGAATACAGCACAAGAGGTTAGCTATTCGAAACGGTGTTCGGGAAATATCATTCCAGAGTTTTGCCGAAGCCGTAGAGGCTCTGTCGAGAGGAAATTTCCCGGTTATAAAATCTGAATCACAGAATATAGGTGGCGGGAATTTTGTATTACCCTTGCCACTTGATAGAAATGAAAAGTGTTCTGCTTGTCCAATGCCAATTGTTGAACATACGCAAGCCAATAATGATGCTAGCCCAACCATGTCTAATGATGAGATTTCTGAATCAATTATCAAAGTCTTAAACGGTCCAAAGCTTTCGGACATAAATAGATTCATGGCATGTAATCTCCGTGTTGACCGTGCTCTCTTAGATCCCTCAATATGCAAAAACGGCATTGTCAGTAATAGCCTTGAATTTGGGAAGAAACTGGATTATTTTGATACATTTACGCATGACTGTACTGAACTAAACAGTATTCATCATGTGGATGAAGGTGGTATTGGTAAAAGTAATGCTTGTAAAAATCTACCAAGAAAATCTAATGAAGATGATGAGGTGCAGAGGGGTTCAAAGAAGGGGCTGATTGACACTGGCACAAATAGAGACAAGGAAGATGTCACTCAGATGGTCCATGCTGCACTCTGTGGAGAAGAATTGACTAATGGTTTGAAACAAAAGAACCCTGGGCATGCAATAAATTTGGAGAAAAAGGAGAGTGAGAGAAACACATTAATTTATAAAATAGCTAATTCCCCTTCAAAACCCAAGCGGCTTTTGAAATCTTCTAGCACATTAAAGGGGGGACAGAAGAATGGTCTACAACCTAAGTCAAACATTCTTAAAGAGACACTGGCCAGCAATAAATGTAGTAATGTTCCAAAAAATGTTGATCAATGTAAAAATGATAAGAAACTTACAACGAGGAAGCAAAATCATAAAGAGAACATGGCAGAAAATATTTCCACTACTACTAAGGAGGAGAAAAAAGCATATCCATCATTTGAAGATTTTACAATAGAGGAAGAAGAAGGTTCAGGTGGTTATGGCACTGTTTACCGTGCTCAAAGAACTACTGATGGAAAACGGGTAGCAATAAAATGTCCTCATAGTAATGCTCATAAGAACCACGTAACTACTGAACGGAATATGCTCGAGCGTTTTGGTGGTAAAAACTTCGTAATAAGGTATGAAGGTTCTTTAAAAAATGGTAACAGCGACTGCTTTGTTTTAGAACATGTTGAGCATGAGAGACCTGAGGTTTTGAAAAAAGAAATTGATGTCGTCCAGCTTCAATGGTACGGGTATTGCATGTTCAGGGCCCTTTATTGCCTGCACAAAGAGGGAGTTGTTCATAGAGACGTTAAACCAGGAAACTTCCTTTTCTCTCGAAAGCTAAGCAGAGGCTACCTTATTGATTTCAACCTTGCAATGGATTTAAAGCAGAAGAACAACGTTGGAAGTAAATCAAAACCAAGCCTGGCTGCATCATCCAATAATGTTTCTCGCTCTTCTGGTTCTGCCCCTTTGGTTCGAGGCAAGAACCTTGGGGGCAGCAAGTCTTTAACATCCAATAAAAGGGCTTTGGCAGATTATAAGAATTATTCTGAACTTAATAGGCATGTAAAGCAAAAGGCTTATACTGGTCCTCTGAAAAATGGTCCTGACATGGTCGGTGGTAGTTTTCTTAGAGCACAAGGAACAGACGGCTCTGGTATAACTTCTGCGAGGGATGCTAGCACTAAGACTGCTTCTGCAGAGAGGCTCAGGGAACCTTTACCTTCCCACGGAAGAAAGGAGCTTATTAGCTTTGTGAATACTATGAAATGTGCAAATAACAGTTCAATAATAGGTCCTTCTTCTCAAAGGAAAAGGGTTACTGCTCCCTCAAGCAGGGTAGATGGCAAGATTTTTCATATTACCCCGATGCCTATGCATTCATCTACTGTTGGTGCGGGATTATTGAGAATCAAAGGTGATGGAAAGCAGAAAAAAGAAGGTTCATGTGTTGGAACCAAAGGATTCCGAGCTCCGGAGGTTTTGTTAAGATCTCAGCATCAGGGACATAAGATTGATATTTGGTCAGCTGGCGTCACTCTACTCTACATGGTGATCGGGAAGAGTCCTTTCACTGGCGATCCAGAACAGAACATTAAAGAAATTGTTAAATTGCGGGGCAGTGAAGAGTTTTGGGAAGTGGCCAAGCTACATGATCGTGAAGTGTCTTTTCCTGTGGAGTTACTTGATGAGCGATACTTGCAGTCGTTGGACTTGGAAGCCTGGTGCAAAACTCACTCAAAGAGACCAGAATTTCTTGAGCAGATCCCGAAATCGTTGTTTGATTTGATAGACAAATGTCTAACAGTTAATCCCAGAAATAGACTTAGTGCTGAAGAAGTTCTGAGACATCAGTTCTTTGACTCACTTCATGAGGCTCTAAGGAAGCAAAGAATGATGCATCGAGCTATCAGATCGGAGGCTGCAGCTTCTGCTGCAATCTAA 2796 0.4195 MAESEFELDLEEKSWHLLALLLRIGQAVYPQRLAAECRLFAASPDFVCYVSSLPRSPLSVTDNGLVTPSVSAVFALGNFFSLRFSLESQSHRFRKRKLLFDSAEDGIQHKRLAIRNGVREISFQSFAEAVEALSRGNFPVIKSESQNIGGGNFVLPLPLDRNEKCSACPMPIVEHTQANNDASPTMSNDEISESIIKVLNGPKLSDINRFMACNLRVDRALLDPSICKNGIVSNSLEFGKKLDYFDTFTHDCTELNSIHHVDEGGIGKSNACKNLPRKSNEDDEVQRGSKKGLIDTGTNRDKEDVTQMVHAALCGEELTNGLKQKNPGHAINLEKKESERNTLIYKIANSPSKPKRLLKSSSTLKGGQKNGLQPKSNILKETLASNKCSNVPKNVDQCKNDKKLTTRKQNHKENMAENISTTTKEEKKAYPSFEDFTIEEEEGSGGYGTVYRAQRTTDGKRVAIKCPHSNAHKNHVTTERNMLERFGGKNFVIRYEGSLKNGNSDCFVLEHVEHERPEVLKKEIDVVQLQWYGYCMFRALYCLHKEGVVHRDVKPGNFLFSRKLSRGYLIDFNLAMDLKQKNNVGSKSKPSLAASSNNVSRSSGSAPLVRGKNLGGSKSLTSNKRALADYKNYSELNRHVKQKAYTGPLKNGPDMVGGSFLRAQGTDGSGITSARDASTKTASAERLREPLPSHGRKELISFVNTMKCANNSSIIGPSSQRKRVTAPSSRVDGKIFHITPMPMHSSTVGAGLLRIKGDGKQKKEGSCVGTKGFRAPEVLLRSQHQGHKIDIWSAGVTLLYMVIGKSPFTGDPEQNIKEIVKLRGSEEFWEVAKLHDREVSFPVELLDERYLQSLDLEAWCKTHSKRPEFLEQIPKSLFDLIDKCLTVNPRNRLSAEEVLRHQFFDSLHEALRKQRMMHRAIRSEAAASAAI* 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00822 931 SUPERFAMILY Protein kinase-like (PK-like) 420 909 IPR011009 -
Lapu10g00822 931 Gene3D Transferase(Phosphotransferase) domain 1 407 594 - -
Lapu10g00822 931 MobiDBLite consensus disorder prediction 275 298 - -
Lapu10g00822 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Lapu10g00822 931 MobiDBLite consensus disorder prediction 583 620 - -
Lapu10g00822 931 SMART serkin_6 436 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00822 931 Pfam Protein kinase domain 763 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00822 931 Pfam Protein kinase domain 438 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00822 931 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 396 914 - -
Lapu10g00822 931 ProSiteProfiles Protein kinase domain profile. 436 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00822 931 Gene3D Transferase(Phosphotransferase) domain 1 747 929 - -
Lapu10g00822 931 FunFam Probable serine/threonine-protein kinase DDB_G0291918 428 597 - -
Lapu10g00822 931 MobiDBLite consensus disorder prediction 666 686 - -
Lapu10g00822 931 MobiDBLite consensus disorder prediction 271 298 - -
Lapu10g00822 931 MobiDBLite consensus disorder prediction 666 680 - -
Lapu10g00822 931 FunFam Kinase like protein 745 915 - -
Lapu10g00822 931 MobiDBLite consensus disorder prediction 583 607 - -
Lapu10g00822 931 MobiDBLite consensus disorder prediction 353 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00822 Lapu-Chr10 9993570 10006843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00822 768 907 Core Cell Cycle Gene Families AT2G38620 31.724 1.98e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Lapu10g00822 Pkinase 1.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00822 K02214 - gmx:100783107 1485.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00822 10 9993570 10006843 Lapu10g00822 10 9993570 10006843 ECH