Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00803 ATGTGGTATTGGGACATGGAGAGGGTTGCTGAGCCGAAGTTACTTCCGCGGAACTTGCCTATCCTTGTTGAGGTATCGAAAGCACACACATCTGCAGCAAGAGAGTCTGGTCAGAGATTTAATCGCCAGGAGGTTTCTGGTGCTGCTGGGATTTCACTCAGAGAAGTGAATCAATTGTCGAAAACAAGGGATGTGCATGTCCCTATTTCACATCTGGCCTCAATTAGAGAAGTGGCCCAATTAACTAATGCGCGAATATATTTGGTACAAGAAGATATGGGATTTGATGCTCGATCCTCTGAGGAATCCCTCACCTTTGAGCCCACCATGACTTGGAAAGGAAATGGCTCTTCGCCCGAAGCTGAAGAGTTTGTGCCTGATGCTGAGACATTGAAGGGAAGCAGCTATTCATTTGAGGATGGTGGTCCAAGTTTATTTGCTGGTGCTAGTCATCCCCCAGAACCTGTTGATACGGATCTTATGAGAACGGTTTATGTACCAATTGGTCAAAACAAATCTGAGGCTGGTTGCTTAATTAAGAACTTGCCCACAAAGGGCCCTTTCTTGGAAGATCTCTCGATTCGTGTTCCTGCAAAGAAACCAAGTCCAGCTGTTCTTTCCCCTGAACAAAGTTTGGTTGAAGAACTGAATGACATTGGGAACTTGGCATTTTTGGGTCCTCAGGCATCACAGAATATAGAGAACTCTCTCCTACCTCCAGATGCTGAGGAAAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCTAGTGGCAATGTGAGTCCACTTAGTAGTATTGATAGTACTGGTGTTGTCACTGCAATGAGCATTGTTAATAGTAGTGCTAGTACATATCGGAGTGATGCAATGACTAGTGATGGCATGCTTAGTTTAGACAGAAACTGTGATAGTATTAAAGGGAGTGTAAGGGGGGATTCACTGGAGAGTGCTAAAACTAGTGCTAGTAGGGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGCAACATAACTGGTAGTGCCAATAAGCCACACAAAGGAAATGATCCTAGGTGGAAGGCTATTCTTGCCATCCGATTACGGGATGGAATTTTGGGCATGAGTCATTTTAGATTACTCAAACGTCTAGGATGTGGTGACATTGGAAGTGTTTATCTTTCAGAACTGAGTGGAACTCGGTGTTATTTTGCTATGAAAGTTATGGATAAGGCATCTCTTGCAAGCAGAAAGAAGCTGACTAGAGCACAGACAGAGAGGGAGATATTGCAGTTGCTGGACCATCCATTTCTACCGACTTTGTATACACATTTTGAGACTGACAGATTCTCGTGTTTGGTAATGGAATATTGTCCAGGCGGTGATCTGCACACTTTAAGGCAACGGCAACCTGGGAAACATTTCTCTGAATATGCTGCGCGCTTTTATGCTGCGGAGGTCCTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTGGTGTATAGAGACCTTAAACCTGAAAATGTGTTGGTCCGAGATGATGGTCACATAATGCTATCAGATTTTGATCTTTCTCTCAGATGTGCTGTGTCACCCACTCTTATTAGATCATCCTATGATGGTGACCCTTCCAAACGGGCTGGTGGTGCATTTTGTGTTCAACCTGCATGTATTGAGCCATCATCAGTGTGCATCCAACCTGCATGTTTTATTCCTCGTTTATTTCCTCAGAAAAACAAGAAGCTAAGGAAGCCGAGAGCTGATCCTGGGTTGCCATCCAGCACCCTTCCAGAGCTTGTTGCCGAGCCTACTGCGGCTCGATCTATGTCCTTTGTTGGCACTCATGAGTACCTTGCCCCAGAAATTATCAAGGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACTTTTGGGATTTTCTTGCACGAGCTATTATATGGTAAAACCCCGTTTAAAGGTTCAGGAAACCGTGCTACACTTTTCAATGTAGTAGGCCAGCAGCTCAGGTTTCCCGAATCACCCGCAACTAGTTATGCCAGCAGGGATCTGATCCGTGGCTTGCTAGTGAAGGAGCCACAGCATCGTCTAGGAGTTAAAAGGGGTGCAACTGAGATCAAGCAGCACCCGTTCTTTGAAGGTGTGAACTGGGCATTGATTAGGTGTAGCACGCCACCTGAAGTGCCGAGACCAGTGGAAAACGAACTACCAGGGAAGGTTGGACCAGTTGATAATACTGTTGGGGTTGGCAACACTAGTAAGAGGATAGTAGGTACTACTGACAACATGAAGCCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2304 0.4544 MWYWDMERVAEPKLLPRNLPILVEVSKAHTSAARESGQRFNRQEVSGAAGISLREVNQLSKTRDVHVPISHLASIREVAQLTNARIYLVQEDMGFDARSSEESLTFEPTMTWKGNGSSPEAEEFVPDAETLKGSSYSFEDGGPSLFAGASHPPEPVDTDLMRTVYVPIGQNKSEAGCLIKNLPTKGPFLEDLSIRVPAKKPSPAVLSPEQSLVEELNDIGNLAFLGPQASQNIENSLLPPDAEEKECVWDASLPPSGNVSPLSSIDSTGVVTAMSIVNSSASTYRSDAMTSDGMLSLDRNCDSIKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRSSYDGDPSKRAGGAFCVQPACIEPSSVCIQPACFIPRLFPQKNKKLRKPRADPGLPSSTLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENELPGKVGPVDNTVGVGNTSKRIVGTTDNMKPGGKYLDFEFF* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00803 767 SMART serkin_6 371 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00803 767 PANTHER FLIPPASE KINASE 1-RELATED 144 726 - -
Lapu10g00803 767 CDD STKc_phototropin_like 369 723 - -
Lapu10g00803 767 MobiDBLite consensus disorder prediction 308 348 - -
Lapu10g00803 767 Pfam Protein kinase domain 601 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00803 767 Pfam Protein kinase domain 372 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00803 767 Gene3D Transferase(Phosphotransferase) domain 1 600 721 - -
Lapu10g00803 767 MobiDBLite consensus disorder prediction 312 344 - -
Lapu10g00803 767 FunFam serine/threonine-protein kinase D6PK-like 599 722 - -
Lapu10g00803 767 FunFam serine/threonine-protein kinase D6PK-like 455 522 - -
Lapu10g00803 767 SUPERFAMILY Protein kinase-like (PK-like) 352 725 IPR011009 -
Lapu10g00803 767 ProSiteProfiles Protein kinase domain profile. 371 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00803 767 Gene3D Transferase(Phosphotransferase) domain 1 455 522 - -
Lapu10g00803 767 Gene3D Phosphorylase Kinase; domain 1 369 454 - -
Lapu10g00803 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Lapu10g00803 767 FunFam Serine/threonine-protein kinase D6PK-like 369 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00803 Lapu-Chr10 9797556 9803587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00803 5 767 AGC Kinase Gene Family AT2G44830 66.242 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu10g00803 Pkinase 1.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00803 - - gmx:100792314 1403.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00803 10 9797556 9803587 Lapu10g00803 10 9797556 9803587 ECH
Lapu10g00803 10 9797556 9803587 Lapu1g01394 1 26756378 26761519 PCT