Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00800 ATGAACCCTCATGCTTCAAACACCATCGTGAATGCCCTTCATCTCTCTGAGCTCCCTTTAACGACGCCGTTTCAGGAAGCCTCGCCATCATTGTGGCCGACGGATGTGTTCAGCCGTAGCGCCAGCTTCCGGAGCATTTTCTTCGCGGAGAACTGGGCGGAGCTGCCCTTGAAGGAGAACGACGCCGACGACATGGTTATCTACGGCGCTTTGCGTGAGGCTGCTGCCACCACCGTATGGTTCCCCGCAAATGGCAATGGGGGGAGCAATGCAGCAGTTGAAATGAAAAATGAGGGTCACATTAGTAACAGTAAAAAAGCCGCGAGTGGAACTCACGCGCCTCCAGTGAAGGGGTTGAGCTACCGCGGTGTGCGGAGGAGGCCATGGGGGAAGTACGCGGCGGAGATAAGAGATGCTAAGAGGAATGGTGTGAGAGTGTGGCTTGGAACCTATGAAACTGCTCATGATGCAGCTTTGGCTTATGATCGAGCTGCATTTAAAATGCATGGCTCCAAAGCAAAGCTGAATTTTCCTCATTTAGTTGGTTCTGATTATGCAGAACCAAGTAGGGTTACATTGAAGAAACGTTCATTGAGTTTATCATCATCGATGGTTACTGCAAAACGGAATCTTTTTGAGTTTTTATTTAAATATGGAACTCAGAATCATACACATATATATGTTTTAGAGAAGGTAACCGACATGCAAAATGCTCCTTCAAATTAG 726 0.4793 MNPHASNTIVNALHLSELPLTTPFQEASPSLWPTDVFSRSASFRSIFFAENWAELPLKENDADDMVIYGALREAAATTVWFPANGNGGSNAAVEMKNEGHISNSKKAASGTHAPPVKGLSYRGVRRRPWGKYAAEIRDAKRNGVRVWLGTYETAHDAALAYDRAAFKMHGSKAKLNFPHLVGSDYAEPSRVTLKKRSLSLSSSMVTAKRNLFEFLFKYGTQNHTHIYVLEKVTDMQNAPSN* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00800 241 FunFam Ethylene-responsive transcription factor 2 120 179 - -
Lapu10g00800 241 PANTHER DNA-BINDING DOMAIN 102 192 IPR044808 GO:0003700|GO:0009873
Lapu10g00800 241 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Lapu10g00800 241 PRINTS Ethylene responsive element binding protein signature 160 180 IPR001471 GO:0003700|GO:0006355
Lapu10g00800 241 SMART rav1_2 120 184 IPR001471 GO:0003700|GO:0006355
Lapu10g00800 241 CDD AP2 121 180 IPR001471 GO:0003700|GO:0006355
Lapu10g00800 241 Pfam AP2 domain 121 170 IPR001471 GO:0003700|GO:0006355
Lapu10g00800 241 Gene3D AP2/ERF domain 120 180 IPR036955 GO:0003700|GO:0006355
Lapu10g00800 241 ProSiteProfiles AP2/ERF domain profile. 120 178 IPR001471 GO:0003700|GO:0006355
Lapu10g00800 241 SUPERFAMILY DNA-binding domain 121 179 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00800 Lapu-Chr10 9771162 9771988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00800 36 197 AP2-EREBP Transcription Factor Family AT2G44840 53.704 8.69e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu10g00800 AP2 1.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00800 K09286 - gmx:100804762 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00800 10 9771162 9771988 Lapu10g00800 10 9771162 9771988 ECH