Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00797 ATGTGGAATCCTCTGTCATGGGTGATGGAAGCTGCTGCTATCATGGCCATAGGCATGGCACATGGAGGGAAAGAAAGAGCAGATTATCAAGATTTTGTTGGCATAGTTCTTTTGCTACTTATAAACTCCACCATCAGTTTCATAGAAGAAAACAATGCTGGCAATGCAGCTTCTGCCCTTATGGCCAGATTAGCCCCCAAAGCAAAGGTACTTCGTGATGGAAAATGGAGTGAAGAAGAAGCTTCAGTGTTGGTTCCTGGAGACATAATTAGCATCAAGCTTGGTGACATCATTCCTGCTGATGCACGTCTCCTTGAAGGTGATCCTTTGAAGATTGATCAGTCTGCTCTTACTGGAGAGTCACTTCCTGTCAGCAAACATCCTGGAGAAGGAGTATATTCTGGTTCAACTTGCAAGCAAGGAGAAATTGAGGCAGTAGTCATTGCAACCGGAGTTCACACCTTTTTTGGGAAGGCAGCCCATCTTGTGGAGAACACAACACATGTTGGACATTTCCAGAAGGTTCTAACATCTATTGGGAACTTCTGCATCTGTTCAATTGCTGTTGGTATGGTCATTGAAATCATTGTGATATATGCAATCCATAAAAAGGGCTACAGAAATGGTATTGATAACCTCCTGGTGCTATTAATTGGTGGCATCCCTATTGCAATGCCAACTGTCCTTTCTGTTACAATGGCTATTGGTTCACACCGGTTGTCTCAGCAGGGTGCCATAACAAAGAGAATGACTGCCATTGAAGAGATGGCTGGAATGGATGTGTTATGTAGTGACAAGACAGGCACATTAACTCTTAACAAGCTTTCAGTGGATAAGAATATCATTGAGGTTTTTGTTAAAGGTGTTGACAATGATATGGTTGTACTAATGGCTGCAAGAGCATCAAGGCTAGAGAACCAGGATGCGATTGATTGTGCTATAGTTTCAATGTTAGCAGACCCAAAGGAGGCGCGAGCTGGAATAAAAGAAGTTCACTTCCTTCCATTCAATCCAACTGATAAAAGAACTGCACTAACATACCTTGATGCTGCTGGTAAGATGCACAGGGTTAGCAAAGGTGCACCAGAGCAGATTCTCAATCTTGCACATAACAAATCAGAAATACAACAGAAGGTTCATACAATTATTGACAAGTTTGCAGAACGCGGACTTCGTTCTCTTGCAGTTGCCCGCCAGGAAGTAACCGAGGGAACTAAAGACAGTCCAGGAGGACCATGGGAGTTTGTTGGCCTTCTCCCTCTTTTTGATCCACCACGCCATGATAGTGCAGAAACAATTAGAAGAGCTCTTGATCTTGGTGTGAGTGTCAAAATGATCACTGGTGATCAACTTGCAATAGGTAAGGAAACAGGAAGACGTCTCGGGATGGGAACTAACATGTATCCTTCTTCATCACTGCTTGGTGAAAATAAAGATGGATTGGGTGCTGTTGCTGTTGATGATCTCATTGAGAACGCTGATGGTTTTGCTGGAGTCTTTCCCGAGCACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAACACATTTGTGGAATGACTGGTGATGGGGTGAATGATGCACCTGCCCTGAAGATAGCAGACATAGGTATTGCTGTAGCAGATGCTACAGATGCTGCCAGAAGCGCATCTGACATAGTCCTAACAGAACCTGGGTTGAGTGTGATCATAAGTGCAGTTTTAACTAGCCGTGCAATTTTCCAGAGAATGAAAAATTACACAATATATGCTATATCTATCACTATCCGTATTGTGCTTGGTTTCATGTTACTGAACAGCTTTTGGAAATTTGACTTTCCTCCCTTTATGGTTCTTGTCATTGCTATTCTCAATGATGGTACCATCATGACAATATCTAAAGATAGGGTTAAGCCCTCTCCAATTCCTGATAGTTGGAAGCTTAGTGAAATTTTTGCAACTGGGATTGTTCTTGGCAGCTATCTGGCTCTAATGACTGTGATCTTCTTCTATATAGTTGTTGAAACAGACTTCTTTCCTAACCATTTTGGTGTGAGGCACTTTCATTATGACCCAAATGCTGAGGACAGTGATCCAACCAAAAGAATGTTGGGATCTGCTGTATATCTTCAAGTTAGTACCATTAGTCAAGCCTTAATTTTCGTGACACGGTCAAGGGGTTGGTCCTACACAGAAAGACCTGGTCTTTTGCTTGTCACTGCCTTCATCATTGCTCAAGCGATTGCAACTGTTATATCTGCCACTCTCACTTGGAATGTTGCTGGGATCAGAAAAATCGGTTGGGGCTGGACAGGAGCCATTTGGCTATACAATACTATAACTTATTTATTTCTAGATCCTTTGAAGTTTGCTGTTCGTTATGCACTAAGTGGAAGGGCTTGGAATCTGGTGGTAAACCAAAGGACCGCATTCATCAATAAAAATGACTTTGGTAGAGAAGCTCGTGAGGCTGCCTGGGCTACTGAGCAGAGAACCTTACATGGCCTCCATTCTGCTGAGTCAAAAGGGTTTACAGATAAGCACACCTTCAGAGAAATTAATACATTGGCAGAAGAGGCAAGAAGGCGAGCAGAGATAGCAAGGCTGAGAGAGCTTCACACTCTGAAAGGTAGAGTCGAATCATTTGCCAAGCTAAGGGGTTTGGACATAGATGCCATGAACGGACACTACACTGTCTAA 2679 0.4289 MWNPLSWVMEAAAIMAIGMAHGGKERADYQDFVGIVLLLLINSTISFIEENNAGNAASALMARLAPKAKVLRDGKWSEEEASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVSKHPGEGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQKVLTSIGNFCICSIAVGMVIEIIVIYAIHKKGYRNGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNIIEVFVKGVDNDMVVLMAARASRLENQDAIDCAIVSMLADPKEARAGIKEVHFLPFNPTDKRTALTYLDAAGKMHRVSKGAPEQILNLAHNKSEIQQKVHTIIDKFAERGLRSLAVARQEVTEGTKDSPGGPWEFVGLLPLFDPPRHDSAETIRRALDLGVSVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDGLGAVAVDDLIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAISITIRIVLGFMLLNSFWKFDFPPFMVLVIAILNDGTIMTISKDRVKPSPIPDSWKLSEIFATGIVLGSYLALMTVIFFYIVVETDFFPNHFGVRHFHYDPNAEDSDPTKRMLGSAVYLQVSTISQALIFVTRSRGWSYTERPGLLLVTAFIIAQAIATVISATLTWNVAGIRKIGWGWTGAIWLYNTITYLFLDPLKFAVRYALSGRAWNLVVNQRTAFINKNDFGREAREAAWATEQRTLHGLHSAESKGFTDKHTFREINTLAEEARRRAEIARLRELHTLKGRVESFAKLRGLDIDAMNGHYTV* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00797 892 Pfam haloacid dehalogenase-like hydrolase 259 535 - -
Lapu10g00797 892 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 789 IPR023298 -
Lapu10g00797 892 SFLD C1.7: P-type atpase like 245 572 - -
Lapu10g00797 892 CDD P-type_ATPase_H 1 783 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lapu10g00797 892 Gene3D - 28 756 - -
Lapu10g00797 892 ProSitePatterns E1-E2 ATPases phosphorylation site. 265 271 IPR018303 -
Lapu10g00797 892 NCBIfam HAD-IC family P-type ATPase 496 598 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00797 892 NCBIfam HAD-IC family P-type ATPase 35 470 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00797 892 Gene3D - 66 150 - -
Lapu10g00797 892 PRINTS H+-transporting ATPase (proton pump) signature 493 509 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00797 892 PRINTS H+-transporting ATPase (proton pump) signature 552 577 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00797 892 PRINTS H+-transporting ATPase (proton pump) signature 702 723 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00797 892 PRINTS H+-transporting ATPase (proton pump) signature 521 537 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00797 892 PRINTS H+-transporting ATPase (proton pump) signature 379 397 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00797 892 FunFam Plasma membrane ATPase 66 150 - -
Lapu10g00797 892 SFLD p-type atpase 245 572 IPR044492 -
Lapu10g00797 892 PRINTS P-type cation-transporting ATPase superfamily signature 439 449 - -
Lapu10g00797 892 PRINTS P-type cation-transporting ATPase superfamily signature 544 556 - -
Lapu10g00797 892 PRINTS P-type cation-transporting ATPase superfamily signature 113 127 - -
Lapu10g00797 892 PRINTS P-type cation-transporting ATPase superfamily signature 263 277 - -
Lapu10g00797 892 PRINTS P-type cation-transporting ATPase superfamily signature 417 428 - -
Lapu10g00797 892 PRINTS P-type cation-transporting ATPase superfamily signature 521 540 - -
Lapu10g00797 892 SUPERFAMILY Calcium ATPase, transduction domain A 66 163 IPR008250 -
Lapu10g00797 892 FunFam Plasma membrane ATPase 415 569 - -
Lapu10g00797 892 Gene3D - 841 892 - -
Lapu10g00797 892 PANTHER CALCIUM-TRANSPORTING ATPASE 1 825 - -
Lapu10g00797 892 NCBIfam plasma-membrane proton-efflux P-type ATPase 1 747 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lapu10g00797 892 FunFam Plasma membrane ATPase 275 422 - -
Lapu10g00797 892 SUPERFAMILY HAD-like 259 568 IPR036412 -
Lapu10g00797 892 Gene3D - 260 558 IPR023214 -
Lapu10g00797 892 Gene3D - 275 422 IPR023299 GO:0000166
Lapu10g00797 892 Pfam E1-E2 ATPase 64 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00797 Lapu-Chr10 9740786 9747566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00797 1 892 Primary Pumps ATPases AT5G62670 79.395 0.0 1425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00797 K01535 - gmx:100794938 1648.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00797 10 9740786 9747566 Lapu10g00797 10 9740786 9747566 ECH