Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00790 ATGTTTCATTCTGAAAAATCATTGAGGAGAACACTCTTCCTTTCTGTCTTGGTCTCAACTGGTTTTTTTCCAACTTTGTCTTCTTATGGGAAGACAAAGAGTACCAATCCTTATGACGAAAAACGGTTGCTACAACAAAATCGGCGGATACAGAAAGAAAACAATGCACCGGAGGACTTCCCAAATTTTATTAGAGAAGGTTTTCAAGTTAAAGTAGTATCTTCAGAGGACTATGTAAAGAGTGACTCAGGGCTCATATACCGGGATTTTGTAGTTGGTCAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCACTTTTCACTATGTTGGCTATAATGAATCTGGTCGCCGAATTGACAGCTCTTACTTGCAGGGTAGTCCTGCCAAAATCCGCATGGGTACCAAGGCATTAGTTCCAGGATTTGAGGAAGGAATTAGAGACATGAGACCAGGTGGGAAGAGAAGAATCATCATCCCCCCTGAACTTGGACCACCAGTAGGACCTTCAACCTTTTTCAGCTCAAAACAGTTTGAAGTTTTTGATGTTGAGCTATTAAGCGTACAAAACTGTGAAAGAAGGACAGTAGCCTTCTACTCGGATGTCATTTGCAATTGA 615 0.4179 MFHSEKSLRRTLFLSVLVSTGFFPTLSSYGKTKSTNPYDEKRLLQQNRRIQKENNAPEDFPNFIREGFQVKVVSSEDYVKSDSGLIYRDFVVGQGDCPKDGQQVTFHYVGYNESGRRIDSSYLQGSPAKIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSVQNCERRTVAFYSDVICN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00790 204 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 98 184 IPR001179 GO:0003755
Lapu10g00790 204 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 101 188 IPR001179 GO:0003755
Lapu10g00790 204 SUPERFAMILY FKBP-like 31 188 - -
Lapu10g00790 204 Gene3D - 45 196 IPR046357 GO:0003755
Lapu10g00790 204 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 3 204 IPR044239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00790 Lapu-Chr10 9696748 9702925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00790 94 186 Calmodulin-binding Proteins AT5G48570 34.737 2.39e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00790 - - gmx:100305486 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00790 10 9696748 9702925 Lapu10g00790 10 9696748 9702925 ECH