Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00787 ATGTCCCTCCACCGTCATGTTTGGAAAGCCTCAAAGCTCTCAAGGATTCCATGGAAGTACAAGAAGTTCGCCATAACACAAGGGCAGAAGTCTCTTACTGATTATCTCCACGCCACGCGCTGCATTCCTTACGCCTACGCTGATCAAATCTCCAAGAACTCCAACACCGCCCTCATCAACCTCATCACCAAGCTCGATTCTTTCTCCCCTCCCCACTACCCCCACAACCTCAACAAGTTCCTCAGGTACAACCCCATTAACGAATTTGAGTTCTTCTTTGAGAGCATTGGCATCCAGCCCTCCAAGTTCCCCTTTTTGTTTCCCCAGAACAAATTCTTCTTTTCAGAAGATGAGACCCTTTTGGATGCTGCTTGTGTTCTCAGCGAATTTGGATTTCCCTGGGACAAGCTTGGGGTGCTGTATGAGGAGAGTGGGTGTGTGTTCAAGTGGGGTGCTTCTGAGTTGAAGGGTAGGCTTTGTGGATTTAAAAGGTATGGTTTTTGCAATGTGCAGGTTGTGGGGATATGCTTGGCTTTCCCCTTTGTGTTTGATTGCCTAAAGGGTGCCGAGGTTGAGGCTTTGTTTTGTGATCTGAAGTTGCTGTTTGGGAAGTTTGGTTTGGCTGGGTGTGTTGAAGAGAAAGGGAATAGTGTGGATGATTGGGTTGGGGTGTGTAGGAAGATAAGGTTGTTTTATGATTTGAATGAAGGGAAGAACATAGGGGAGTTCATTGGAGGGAACAATGGTGTTGGTGTAGGTGTTATTGTTGAGCATGGGGAAGAGGAGTTGGTTCAAGCAATTGAGTATTTTTGTAGGTTTGGTGCGAAGAAAGAGGACGTGGCACGGTTGATTTTAAATGGACCGGAGTTGTGGGAGCTTGATTTGAAGACGGGGATGGTCAATGTGATGAAGCTGTTGAAACACTTTGGAATGAGTTCCGATGGTGTTGTTATTATTAGGAGGGATTATGCTCACGTGTTGGGGACAGTCAAGATGTGTAATCTGCCAAATGTGATGAGAGCTTTGGGTTTACATGAGTGGTTTTTTGACAAGATTAAGGATGGGAATCATAGTTTGTTGGTTAGTTTTGTCGCGAACAATCCCAAGGTGGTTCGAGACAAAGGTTATCTAGATTGTTTGAAGGCTATTCAGATGTCAAGAACTCCGACTCACAGTATGAACAAGCTGAACTTCTTGCACACCATTGGCTTTGGAGAAAATGGTTTGGCCATGTATTTTTTGTCTTATATGCACGGAACAGGTGATGAGTTACAAAAGAGATTTGATTGCCTTCTACATCTTGGGATTGAGTTTTCAGAGGTCTGTAAGATGATCAAGGTTCATCCTAAGATTCTTAGCCAAAACCCTGAAAATTTGGAACAAAAGTTTAATTTCTTGTGTCATGAGATGGGACACTCCGTGGAGAGTTTGGCCACTTTTCCATCATTCTTGTGCTTTGACTTAGAGAATCGCATTAAGCCTAGGTATAGGTTCCATATGTGGGTTATGGAAAAGGGTCTGTGTTCCAAAAGATATTCCATTGCAAGCATGGTTGCAACAAGCAACAAGAATTTTGTTGCCCGTGCTTTTAAAATCCACCCTGCTGCTCCGAAACATTGGTTTGAGCAATTTTATCCCGGAAATTCGCCAGTGTGA 1656 0.4396 MSLHRHVWKASKLSRIPWKYKKFAITQGQKSLTDYLHATRCIPYAYADQISKNSNTALINLITKLDSFSPPHYPHNLNKFLRYNPINEFEFFFESIGIQPSKFPFLFPQNKFFFSEDETLLDAACVLSEFGFPWDKLGVLYEESGCVFKWGASELKGRLCGFKRYGFCNVQVVGICLAFPFVFDCLKGAEVEALFCDLKLLFGKFGLAGCVEEKGNSVDDWVGVCRKIRLFYDLNEGKNIGEFIGGNNGVGVGVIVEHGEEELVQAIEYFCRFGAKKEDVARLILNGPELWELDLKTGMVNVMKLLKHFGMSSDGVVIIRRDYAHVLGTVKMCNLPNVMRALGLHEWFFDKIKDGNHSLLVSFVANNPKVVRDKGYLDCLKAIQMSRTPTHSMNKLNFLHTIGFGENGLAMYFLSYMHGTGDELQKRFDCLLHLGIEFSEVCKMIKVHPKILSQNPENLEQKFNFLCHEMGHSVESLATFPSFLCFDLENRIKPRYRFHMWVMEKGLCSKRYSIASMVATSNKNFVARAFKIHPAAPKHWFEQFYPGNSPV* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00787 551 SMART mt_12 442 473 IPR003690 GO:0003690|GO:0006355
Lapu10g00787 551 SMART mt_12 474 508 IPR003690 GO:0003690|GO:0006355
Lapu10g00787 551 SMART mt_12 281 312 IPR003690 GO:0003690|GO:0006355
Lapu10g00787 551 FunFam Transcription termination factor MTEF18, mitochondrial 380 540 - -
Lapu10g00787 551 PANTHER CGI-12 PROTEIN-RELATED 108 532 IPR003690 GO:0003690|GO:0006355
Lapu10g00787 551 Gene3D Transcription termination factor 3, mitochondrial 258 544 IPR038538 -
Lapu10g00787 551 Pfam mTERF 423 525 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00787 Lapu-Chr10 9677980 9682546 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu10g00787 mTERF 1.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00787 - - gmx:100812245 841.647