Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00774 ATGTTTGGACGTGGTGGACCAAGGAAGAGTGATAACTCTAAATATTATGATATTCTTGGAGTTTCAAAGAATGCCAGTGAAGATGAAATCAAGAAAGCCTACAGAAGGGCTGCTATGAAGAACCATCCAGATAAGGGTGGAGATCCTGAGAAGTTTAAGGAGTTAGGTCAAGCATATGAAGTTTTAGGTGATCCTGAGAAGAAAGAGATGTATGATCAGTATGGTGAAGATGCCCTTAAAGAAGGGATGGGAGGAGGAGGAGGAGGAGGTTCTTTTCATAATCCATTTGATATATTTGAGTCGTTTTTTGGAGGATCAAGCTTTGGTGGTGGTGGTAGTTCACGAGGTAGAAGACAAAAACAGGGTGAAGATGTTGTGCACTCTTTAAAGGTGTCGTTGGAGGATGTCTATAATGGTGCCACTAAGAAACTATCTCTCACTAGGAATGTGTTATGCTCAAAATGTAAAGGGAAAGGTTCAAAAAGTGGAACATCTGGTAGGTGTTTTGGTTGCCAGGGCACTGGTATGAAGGTCACAAGAAGACAGATAGGCTTAGGCATGATTCAACAAATGCAACATGTCTGCTCGGACTGCAGAGGATCTGGTGAGGTTATTAACGAGAGAGATAAATGCCCTCAATGCAAAGGAAACAAGGTTACTCATGAAAAGAAGGTGCTGGAGGTGCATGTTGAAAAGGGGATGCAGCAGGGTCAGAAGATTGTTTTTGAAGGACAAGCTGATGAATCTCCCGACGCATTGACAGGGGACATTGTTTTAGTATTGCAAGTGAAGGAGCACCCAAAGTTCAGGAGGGAGCAAGACGATCTCTTCATTGATCACAATCTCAGCTTACACGAGGCACTCTGTGGCTTCCAGATTGCTGTCACACATCTTGATGGAAGGCAATTACTGATCAAATCAAACCCCGGGGAAGTCATCAAGCCAGGTCAATGTAAAGCAATAAATGATGAGGGAATGCCACAACACAACAGGCCATTCATGAAGGGTCGTCTCTACATCCAGTTTAATGTTGAATTCCCAGAATCAGGGTTCATTTCCCCTGATCAATGCCAGTTATTGGAAAAGGTATTACCTCAGAAGGGCAGCAAGCACATGTTAGATTCAGAGCTGGATGAATGCGAGGAGACCACGTTGCATGATGTCAACCTGAAGGAGGAGATGAGACGAAAGCATCAACACCATTCCCGCGAGGCATACGATGAAGATGAGGATGATGGCCCTTCTGGTCACCGAGTGCAATGTGCTCAACAGTAG 1275 0.4424 MFGRGGPRKSDNSKYYDILGVSKNASEDEIKKAYRRAAMKNHPDKGGDPEKFKELGQAYEVLGDPEKKEMYDQYGEDALKEGMGGGGGGGSFHNPFDIFESFFGGSSFGGGGSSRGRRQKQGEDVVHSLKVSLEDVYNGATKKLSLTRNVLCSKCKGKGSKSGTSGRCFGCQGTGMKVTRRQIGLGMIQQMQHVCSDCRGSGEVINERDKCPQCKGNKVTHEKKVLEVHVEKGMQQGQKIVFEGQADESPDALTGDIVLVLQVKEHPKFRREQDDLFIDHNLSLHEALCGFQIAVTHLDGRQLLIKSNPGEVIKPGQCKAINDEGMPQHNRPFMKGRLYIQFNVEFPESGFISPDQCQLLEKVLPQKGSKHMLDSELDECEETTLHDVNLKEEMRRKHQHHSREAYDEDEDDGPSGHRVQCAQQ* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00774 424 Gene3D - 114 266 - -
Lapu10g00774 424 CDD DnaJ_zf 152 218 IPR001305 GO:0031072|GO:0051082
Lapu10g00774 424 SUPERFAMILY HSP40/DnaJ peptide-binding domain 269 349 IPR008971 GO:0006457|GO:0051082
Lapu10g00774 424 SUPERFAMILY HSP40/DnaJ peptide-binding domain 118 276 IPR008971 GO:0006457|GO:0051082
Lapu10g00774 424 Gene3D - 267 348 - -
Lapu10g00774 424 Pfam DnaJ central domain 152 218 IPR001305 GO:0031072|GO:0051082
Lapu10g00774 424 Hamap Chaperone protein DnaJ [dnaJ]. 11 393 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lapu10g00774 424 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 13 404 IPR044713 GO:0006457|GO:0030544
Lapu10g00774 424 FunFam DnaJ subfamily A member 2 266 348 - -
Lapu10g00774 424 Gene3D DnaJ domain 11 113 IPR036869 -
Lapu10g00774 424 ProSiteProfiles Zinc finger CR-type profile. 139 223 IPR001305 GO:0031072|GO:0051082
Lapu10g00774 424 Pfam DnaJ domain 14 72 IPR001623 -
Lapu10g00774 424 SUPERFAMILY Chaperone J-domain 11 112 IPR036869 -
Lapu10g00774 424 SMART dnaj_3 13 67 IPR001623 -
Lapu10g00774 424 ProSiteProfiles dnaJ domain profile. 14 75 IPR001623 -
Lapu10g00774 424 CDD DnaJ_C 123 349 - -
Lapu10g00774 424 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Lapu10g00774 424 PRINTS DnaJ domain signature 16 34 IPR001623 -
Lapu10g00774 424 PRINTS DnaJ domain signature 47 67 IPR001623 -
Lapu10g00774 424 PRINTS DnaJ domain signature 67 86 IPR001623 -
Lapu10g00774 424 MobiDBLite consensus disorder prediction 391 424 - -
Lapu10g00774 424 Pfam DnaJ C terminal domain 126 347 IPR002939 -
Lapu10g00774 424 MobiDBLite consensus disorder prediction 391 416 - -
Lapu10g00774 424 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 149 220 IPR036410 -
Lapu10g00774 424 CDD DnaJ 15 64 IPR001623 -
Lapu10g00774 424 Gene3D - 152 218 - -
Lapu10g00774 424 FunFam DnaJ subfamily A member 2 152 218 - -
Lapu10g00774 424 FunFam Chaperone protein DNAj, putative 11 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00774 Lapu-Chr10 9595073 9599675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00774 15 110 C2H2 Transcription Factor Family AT1G74250 38.095 7.45e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00774 K09503 - gmx:100812236 740.339