Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00773 ATGAGAAAACGTATCAATATGGAAAGTGATGCTGACTTCTTCAATTCCTTTGCCACATCCTCCTCCTCCTCCACTTCCACTTCCACTTCCACTTCCACCACCACCACAACCCCTTCAATCTTCATTGACACCAACACTTCTAGCACATCATCATCATTATCATCATCCTCAACACCACCTACATCTTCAACCTCAAACTCAGATTCATGCACCAAAGAACACCCCAAAACCCCTCAAAATGACTCAACCACTTCACAAACCTCGTTGGAAAATGAGAAGGACTCAAAGGGGTGCAGGAAGAGGCAGAGGGAGAATCCTAGCAATCAGAACTACCCCCCTACTTATAGGGGTGTGAGGATGAGGAATTGGGGCAAATGGGTGTCTGAAATCCGTGAGCCAAGGAAGAAGTCAAGAATTTGGCTTGGAACATACCCTACAGCAGAAATGGCTGCTAGAGCACATGATGTAGCTGCCTTAGCCATCAAAGGCCATTCTGCATACCTCAATTTCCCTGAATTGGCTCAAGAACTTCCAAGGCCAGCTACCACATCACCTAAGGACATTCAAGCTGCAGCTGCAAAAGCAGCAAACGCATCCTTTGAGGTGGCGAAGCATTGCCAAAGTATTATTGAAGATGAAGAAGGAGAAGAACCAAGCCAAGCAGAACATGCCTCATCTTCACCTCTCTCAATAGACAACAACACACAAGACTCTTCAAGCTCTCACTCTACCAATGATGATGACAGTTTGTTTGACCTACCAGATCTTTTCCCTGATGGTCTTTGCTCCTATTCTTCTTCTTGGCATTTGTGTGCAGTTGGTAGTGGCTTTAGGCTTGAGGAGTCACTTTTTTGGGAGAATTATTAG 867 0.4533 MRKRINMESDADFFNSFATSSSSSTSTSTSTSTTTTTPSIFIDTNTSSTSSSLSSSSTPPTSSTSNSDSCTKEHPKTPQNDSTTSQTSLENEKDSKGCRKRQRENPSNQNYPPTYRGVRMRNWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPELAQELPRPATTSPKDIQAAAAKAANASFEVAKHCQSIIEDEEGEEPSQAEHASSSPLSIDNNTQDSSSSHSTNDDDSLFDLPDLFPDGLCSYSSSWHLCAVGSGFRLEESLFWENY* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00773 288 SMART rav1_2 114 177 IPR001471 GO:0003700|GO:0006355
Lapu10g00773 288 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Lapu10g00773 288 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Lapu10g00773 288 FunFam Ethylene-responsive transcription factor 2 114 172 - -
Lapu10g00773 288 MobiDBLite consensus disorder prediction 12 91 - -
Lapu10g00773 288 MobiDBLite consensus disorder prediction 1 117 - -
Lapu10g00773 288 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Lapu10g00773 288 Pfam AP2 domain 113 164 IPR001471 GO:0003700|GO:0006355
Lapu10g00773 288 SUPERFAMILY DNA-binding domain 114 172 IPR016177 GO:0003677
Lapu10g00773 288 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 92 257 - -
Lapu10g00773 288 MobiDBLite consensus disorder prediction 212 246 - -
Lapu10g00773 288 CDD AP2 115 173 IPR001471 GO:0003700|GO:0006355
Lapu10g00773 288 Gene3D AP2/ERF domain 114 172 IPR036955 GO:0003700|GO:0006355
Lapu10g00773 288 MobiDBLite consensus disorder prediction 221 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00773 Lapu-Chr10 9582405 9583271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00773 100 284 AP2-EREBP Transcription Factor Family AT2G44940 54.808 2.87e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lapu10g00773 AP2 3.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00773 - - gmx:100801129 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00773 10 9582405 9583271 Lapu10g00773 10 9582405 9583271 ECH