Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00766 ATGTTGGACTATGAATGGGGAAACCCGTCTTCAATAATGCTAACCGGAAACGAGGAGACCGCCGCCGGAGCTTCCGACCAAACCCACCGTCAAATCTTCGACCACTACGCCTCACACTCCCTCATCCCCGACCACTTTCTTCACGCGCCAACACACTCCTCTGTCACCACCGCCGCGGCAGCCACCGTGGACTTCACCAACCACCACCACCACCACTTCAACCCGCAACCCCACCACCACCACGTCAACCACCACCACCCCTTCTTCGACCCACGCGCCTTTCACGGCGCGTCCTCCACCTCCTACCCCCCACCCCCTTCCATGCTTTCCCTTGACCCGCTTCCCCACGTCAACGCCGCCAACTGCGTCCCTGGTCCCGGACCCGGCCCAGGCGGACTTCTCCTCGTTCCCAAGTCTGAGGATGTCGGCCGGCCCATGGACTTTGTCGGCTCACGAATTGGTCTAAATCTCGGAGGTCGAACGTATTTCTCCTCCTCCGAGGATGACTTCGTGAGCCGCCTCTACCGTCGGTCTCGGCCGGTGGAATCGGGTTCGGCTGCTTCCTCGAACTCGCCGCGGTGCCAGGCCGAGGGATGCAATGCTGATCTGTCTCAGGCCAAGCACTACCACCGCCGCCACAAGGTGTGCGAGTTCCACTCCAAAGCCGCCACCGTTATCGCCGCCGGGTTGACTCAGCGATTCTGCCAGCAATGCAGCAGGTTCCATCTTCTCTCTGAGTTTGATAACGGAAAACGTAGCTGCAGGAAGAGATTGGCAGATCACAATCGCCGCAGAAGAAAAACTCAGCAACCAACTCAAGAAATTCAGAAATCTCAACCCTCTTTGGATAATGTTGCAAGATCTCCACCAGACTCCGGAGCTCAGTCGTCTTCGGTGACGGTGGCCGTGTCGCCGCCTGACTATTTCCGGCAGAGGCCTTATCAAAACACAAACCCTTCTACAAATTCAAGCTCACTGTTTTTCTCTAGCGGGTAG 996 0.5783 MLDYEWGNPSSIMLTGNEETAAGASDQTHRQIFDHYASHSLIPDHFLHAPTHSSVTTAAAATVDFTNHHHHHFNPQPHHHHVNHHHPFFDPRAFHGASSTSYPPPPSMLSLDPLPHVNAANCVPGPGPGPGGLLLVPKSEDVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPVESGSAASSNSPRCQAEGCNADLSQAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPTQEIQKSQPSLDNVARSPPDSGAQSSSVTVAVSPPDYFRQRPYQNTNPSTNSSSLFFSSG* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00766 331 Pfam SBP domain 194 267 IPR004333 GO:0003677
Lapu10g00766 331 FunFam Squamosa promoter-binding-like protein 14 185 255 - -
Lapu10g00766 331 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 177 325 IPR044817 GO:0003677
Lapu10g00766 331 ProSiteProfiles Zinc finger SBP-type profile. 191 268 IPR004333 GO:0003677
Lapu10g00766 331 Gene3D - 184 255 IPR036893 GO:0003677|GO:0005634
Lapu10g00766 331 MobiDBLite consensus disorder prediction 257 331 - -
Lapu10g00766 331 MobiDBLite consensus disorder prediction 272 331 - -
Lapu10g00766 331 SUPERFAMILY SBT domain 192 272 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00766 Lapu-Chr10 9505414 9508366 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00766 1 241 SBP-box Gene Family AT1G02065 44.275 2.45e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lapu10g00766 SBP 4.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00766 - - gmx:100802206 528.094