Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00765 CACGTGGCGTTGGTGAATGCGAAAGAGTACCACAGGAGGCACAGAGTCTGTGATATGCATTCGAAGGCACCCAAAGTTGTGGTGTTGGGGTTGGAGCAGAGATTCTGTCAGCAGTGTAGCAGGTTTCATGTGGTGTCAGAGTTTGACGACTCAAAGAGAAGTTGTAGGAGAAGATTAGCAGGGCATAATGAGAGAAGAAGAAAAAGCTCTCACCTTTCTATTACTAGGAGTTCTAGACAAGGGTGTGCTCTCTCTCTTCTGTCATTTGGGAGCAGTGATAACTGGTCTCCTCATGCTGATCTCTCTACAAGATGCAGTGCAGCATTGCGTGAACTGATAGCAGAAAACCGTGCTGCCCTAATGACCAGACAGCAACAACAGCAACAATACCATCAACTTGTTTATGATAGAGATCACTGCCATGTTGTTGTGCCCCACCATGATGATGATGATGACGATGATGATGCAGTGGATGAAGAAGAACAAGACTTTGAGGAGATACAACCTGAGTCCAATTATTTTCCTCAACACATGTTTTCCCAGACACAATAA 552 0.4511 HVALVNAKEYHRRHRVCDMHSKAPKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSSHLSITRSSRQGCALSLLSFGSSDNWSPHADLSTRCSAALRELIAENRAALMTRQQQQQQYHQLVYDRDHCHVVVPHHDDDDDDDDAVDEEEQDFEEIQPESNYFPQHMFSQTQ* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00765 183 Coils Coil 109 129 - -
Lapu10g00765 183 Pfam SBP domain 3 68 IPR004333 GO:0003677
Lapu10g00765 183 ProSiteProfiles Zinc finger SBP-type profile. 1 69 IPR004333 GO:0003677
Lapu10g00765 183 MobiDBLite consensus disorder prediction 149 167 - -
Lapu10g00765 183 MobiDBLite consensus disorder prediction 143 183 - -
Lapu10g00765 183 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 2 131 IPR044817 GO:0003677
Lapu10g00765 183 Gene3D - 1 56 IPR036893 GO:0003677|GO:0005634
Lapu10g00765 183 SUPERFAMILY SBT domain 3 71 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00765 Lapu-Chr10 9480248 9481984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00765 4 70 SBP-box Gene Family AT2G33810 71.642 1.28e-31 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lapu10g00765 SBP 1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00765 - - pvu:PHAVU_010G056200g 285.804