Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00752 ATGGATCATAGAAAGGTATTGGAGGAGCTTGTAAGAGGTCACGAGTTTGCTACTCAACTTCGACTAGTGATTAATGGAAAAGATAAGTCTGCAACAACCACCCCATTTGTCCATAGTCTTGCCAAGAACGTGCTTAGATCCTTCACAAACACCCTCTTCCTCTTGGACAAGTTTCCCTCTCATGACCTTTCCAATCTTGTCACTCCCACCAAATCTGAGCCTGAGGACTCCCAAGAAAGTTGCAAGAGTTTCAACAGTTTCAAGAACAGAAGAGGGTGCTACAAGAGAAAAAGAACTACACAAGAATGGGAGAAGGTTTCAGAAGCTCCAACAGTTGATGGTCACCACTGGAGAAAGTATGGCCAAAAAGATATCCTCAAAGCCAAATACTCAAGGAACTATTACAGGTGCACTCACAAGTATGATCAAAATTGTCAAGCAACAAAACAAGTGCAAAGAATTCAAGAGGATCCTCCCTTGTATAAGACCACCTATTTTGGGCACCACACATGCAATGAGTTGCTAAACTCTGAAATCATACTTGATTCCAACAATTCTCCTTCTGACACTTCCATACTGCTTAGCTTTAACAACAGCTTCCCTACTCCAACCAAGCAAGAGTGCCCCTTTTTATCATCCTCATCATCTCTTAATCCCTCACCATCAGTGATCAAAGATGATAGAATTCCCTCATCTTCCTCTGATTATTACATGCTTTCCCCAGAACCCACTTTAGATGATTCTTCAAGACACAACAATCTCATTCTACCACTCGAAGACTGGGATGTTATGTCATCTGCCCTGTGTGATTCTGTTGACCTTGATGATGGCAATCTTTTGTTGGATTTTGATGATTAA 858 0.4149 MDHRKVLEELVRGHEFATQLRLVINGKDKSATTTPFVHSLAKNVLRSFTNTLFLLDKFPSHDLSNLVTPTKSEPEDSQESCKSFNSFKNRRGCYKRKRTTQEWEKVSEAPTVDGHHWRKYGQKDILKAKYSRNYYRCTHKYDQNCQATKQVQRIQEDPPLYKTTYFGHHTCNELLNSEIILDSNNSPSDTSILLSFNNSFPTPTKQECPFLSSSSSLNPSPSVIKDDRIPSSSSDYYMLSPEPTLDDSSRHNNLILPLEDWDVMSSALCDSVDLDDGNLLLDFDD* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00752 285 MobiDBLite consensus disorder prediction 210 229 - -
Lapu10g00752 285 Pfam WRKY DNA -binding domain 113 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu10g00752 285 SMART WRKY_cls 111 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu10g00752 285 Gene3D WRKY domain 99 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu10g00752 285 SUPERFAMILY WRKY DNA-binding domain 109 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu10g00752 285 ProSiteProfiles WRKY domain profile. 106 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu10g00752 285 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 193 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00752 Lapu-Chr10 9361595 9363450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00752 5 172 WRKY Transcription Factor Family AT3G56400 39.326 3.48e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu10g00752 WRKY 4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00752 - - var:108346831 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01702 1 29940778 29942719 Lapu10g00752 10 9361595 9363450 PCT