Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00750 ATGGCTTCTCTGCTCCCTCCAACTCCAACTGCTACTTCCACACTCAAACACAGCCAAATGGCTTCTCTCTTGAAACTCACCACTCCAAACAATGCTTCTTTCTTGCCAAACTCAAACCAGCGTTTGAAGAGCAACACTGCAAAGTGCCATGCACTGTTTGGTGAGGTGGCAAAAGGGTTGGTGGAGAACAGTGTTGGCCTGGACCAGTTTGAAAGTATCCAATCAGGAATAGTGCAGTTGGAGAGAGTGACTGAAGGCTTATCTGACATGCAGAGGTGGGGGGTTGTTGTGTTTGGTGGGTTGACGTGGATTTACTTGACTGCGAGGCCAGGTGTGCTTGTTGGTGCCATTGATGCGTACCTTTTGGCTCCTCTTCAACTGGGGTTGGACAGTTTGGTTGGAAGGAGGAACTTGAAGAGGAGTGACTTTGTGGTTGGAGAAAAGCTTGGAGAAGGGTCTTTTGGTATTGTCTATTCGGGTGTTTTGGTTCCAAAGAATGGGAATGGGAATGGGAATAATGGGAGTGTTGATGTGGTGCAGAAGAGGGGGAGAGGCAAGGTAACGCAGGTGGAACCCAAGTCTAAGGATAAAGTCATTCTTAAAAAGGTTAAGGTTGGAATCCAAGGTGCTGAGGAGTTTGGTGATTATGAAGAGTGGTTCAATTACAGGCTATCTAGGGCAGCTCCCGAAACATGTGCTGACTTCCTTGGAAGTTTTGTAGCTGACCGAACAAATTCACAGTTTACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGATCGTACTCTTGCTGATTACATGAAGGATCGCAACTTTCCTTCAAACTTAGAATCTGTGATGTTTGGACGTGTCCTGCAAGGTGTGGACTCTTCAAAACGAAATGCATTGATCATCAAACAAATAATGCGCCAGATCATTACGTCTCTGAGGAAAATTCATGATACTGGCATTGTTCACAGGGATGTAAAACCAGCCAACTTAGTGGTTACTAAACGAGGGCAGATTAAACTCATTGATTTTGGTGCAGCAACAGACTTGCGGATTGGAAAGAATTATGTTCCCAACCGTACCCTTTTGGATCCTGATTACTGCCCACCAGAATTATATGTACTCCCAGAAGAAACACCAAGTCCACCACCAGAACCAATTGCTGCTTTCCTTTCACCAATCCTTTGGCAGTTAAACAGCCCTGATTTGTTTGATATGTATTCAGCTGGGATTGTACTCCTTCAAATGGCAATACCATCCTTAAGGTCTTCTGCTGCTTTGAAGAATTTTAACTTGGAACTAAAAAACTGTGGATATGACTTGAAAAAATGGAGGGACTATACTCGCATCAGACCTGACCTCCAAATTCTAGATAGTGAATCTGGTAGAGGGTGGGACTTAGCTACCAAGCTTGTATCTGAGAGAGGTTCCCTAAGAAGGGGGCGTTTATCTGCTGCTGCAGCTCTGAGACATCCTTATTTTCTTCTGGGTGGTGATCAGGCAGCTGCAGTACTTTCAAAACTAAGCTTAAGCAGAAAATGA 1536 0.446 MASLLPPTPTATSTLKHSQMASLLKLTTPNNASFLPNSNQRLKSNTAKCHALFGEVAKGLVENSVGLDQFESIQSGIVQLERVTEGLSDMQRWGVVVFGGLTWIYLTARPGVLVGAIDAYLLAPLQLGLDSLVGRRNLKRSDFVVGEKLGEGSFGIVYSGVLVPKNGNGNGNNGSVDVVQKRGRGKVTQVEPKSKDKVILKKVKVGIQGAEEFGDYEEWFNYRLSRAAPETCADFLGSFVADRTNSQFTKGGKWLVWKFEGDRTLADYMKDRNFPSNLESVMFGRVLQGVDSSKRNALIIKQIMRQIITSLRKIHDTGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAAFLSPILWQLNSPDLFDMYSAGIVLLQMAIPSLRSSAALKNFNLELKNCGYDLKKWRDYTRIRPDLQILDSESGRGWDLATKLVSERGSLRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSLSRK* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00750 511 Pfam Protein kinase domain 299 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00750 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Lapu10g00750 511 SMART serkin_6 143 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00750 511 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 45 511 - -
Lapu10g00750 511 Gene3D Phosphorylase Kinase; domain 1 183 259 - -
Lapu10g00750 511 ProSiteProfiles Protein kinase domain profile. 143 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00750 511 SUPERFAMILY Protein kinase-like (PK-like) 139 493 IPR011009 -
Lapu10g00750 511 Gene3D Transferase(Phosphotransferase) domain 1 290 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00750 Lapu-Chr10 9343608 9347740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00750 169 346 MAP Kinase Kinase Gene Family AT4G29810 25.698 6.36e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Lapu10g00750 Pkinase 6.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00750 - - gmx:100788727 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00750 10 9343608 9347740 Lapu1g01697 1 29891693 29894608 PCT