Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00715 ATGCACCACAACCTTAACCTTGCAAGGTTGTGGCTTGCTTTGCTTGCGGTCTCAACCACCTCGGTTCATTGCAAAACCTCCTCCCAAGATGTCTCGGCCCTTAATGTGATGTATTCCAGCTTAAATTCCCCTTCAAAGCTGAGTGGCTGGAAATCAAGTGGAGGTGATCCTTGTGGTGACTCCTGGGAAGGAATCAAATGCTCAGGCTCTTCTGTCACAGAAATAGATTTGTCAGACATGGGACTTACTGGATCAATGGGCTACCAGTTGTCCAGCTTATCATCAGTAACCTACTTTGATTTGAGCAACAACAACCTCAAGGGTGATATACCATATCAACTTCCTCCAAAAGCTCGTCATATAGATCTTTCGAAGAATGGCTTCACGGGAAGTATACCATTTTCCTTTTCTGAGATGGACAACCTCAACCACCTAAATCTTGCACATAATCAGCTCCAGAACCAGTTGGGAGATATGTTTGGAAAGCTCAGTAAACTCAAACAACTGGATGTATCATTCAATTCTCTATCAGGAAACCTACCGCAGAGTCTCAAATCGCTCAAAAACCTCAAGAAGTTGCACCTTCAAAACAACCAATTCACTGGTTCAGTAAATGTTCTTGCCAACCTTCCACTTGAAGATTTGAATGTCGAAAACAACAAATTTACTGGTTGGGTTCCTGAGGAGTTGAAGAATATAGATAATTTGGAAACTGGAGGAAACTCATGGTCAAGGGGACAAGCACCTCCTCCTCCTCCTGGTACTCCCCCCATCAAAAATACCAAGAAAAAGAAAGATGAATCCGTTATTAGTGGAGTAACTATAGCAGGCATAGTTTTTGGCATACTGGCAGTAATTGTGATTGTTCTTGCTCTTTCTAAAAGAAGGTCATCAAAACCTTCTTCACACTTCATCGATGAAGAGAGGCGTAGCCAGCATAGATCTTTTACACCCCTTGCATCTCAGGAGTTATCAAAAGATTCGAGTTCTGATGCCAGCAAAGAATTCAAAGGTGGATTTAACTCCTTGGATTCCACTTCAATTGACGTAAAGGCTTTGCAAAAATCTTCGTCAATTGGTGTTAGGTCGTCTGTCTCCGATTGTGTGCAATCCTTCAATGACAATGAGTTTGCAAATCGTCTAAATGCCAAAAGGAGTACATCAATCCGTGTTACTACTTTTTCACTGGCAGAGTTGCACTCGGCTACTGCTAATTTTGCATCAGGTCGACTTCTTGGTGAAGGATCCATAGGATGTGTTTATCGGGCTAAATATGCTGATGGAAAGGTATTGGCTGTAAAAAAAATCAACCCTTCGCTTTTCCATGGTGGTCCCCCTGAGGAATTCCCGCAGATTGTTTCAAACCTCAGCAAACTTCACCACCCAAACATTGTTGAGCTTGTCGGTTATTGTTCGGAACAGGAGCACGTGTTAATATATGATTATTTCAGAAATGGCTCTCTCCATGGCTTTTTACACTTATCAGACGACTTCAGCAAACCACTCACTTGGAACACAAGAGTCAGGATCGCATTGGGAACAGCTCGGGCTATTGAGTACCTGCATGAAATTTGTTCTCCTCCTTTACTGCACAAGAATATTAAGTCCTCGAATATTTTGCTTGACACGGATCTGAATCCTCGTCTCTCAGACTATGGTTTGGCATCCTTCCACCAGCGTACTAGCCAAAATCTTGGGGCAGGATATAATGCACCAGAATGCACAAAACCTTCAGCCTTTACACAAAAGAGTGATGTATACAGTTTTGGGGTAGTCATGCTGGAACTTCTGACAGGTCGAATGGCTTTCGACAGTTCAAAGCCAAAAGCAGAACAATGTCTGGTTCGTTGGGCAAGCCCACTTCTTCACGACATTAACGCCGTGGAGAAAATGGTGGACCCTGCCTTGCGGGGGCTTTACCCTCCTAAGTCACTCTTCCGATTTGCTGATATCATCGCCCTCGCTGTTCAGTCTGAGCCTGAATTTCGGCCACCTGTGTCGGAGTTAGTTCAGTCTTTAATGCGATTGGTTCAACGTTCAAGTATGACAATGAGGGAGGATTTTGAGTGA 2070 0.4357 MHHNLNLARLWLALLAVSTTSVHCKTSSQDVSALNVMYSSLNSPSKLSGWKSSGGDPCGDSWEGIKCSGSSVTEIDLSDMGLTGSMGYQLSSLSSVTYFDLSNNNLKGDIPYQLPPKARHIDLSKNGFTGSIPFSFSEMDNLNHLNLAHNQLQNQLGDMFGKLSKLKQLDVSFNSLSGNLPQSLKSLKNLKKLHLQNNQFTGSVNVLANLPLEDLNVENNKFTGWVPEELKNIDNLETGGNSWSRGQAPPPPPGTPPIKNTKKKKDESVISGVTIAGIVFGILAVIVIVLALSKRRSSKPSSHFIDEERRSQHRSFTPLASQELSKDSSSDASKEFKGGFNSLDSTSIDVKALQKSSSIGVRSSVSDCVQSFNDNEFANRLNAKRSTSIRVTTFSLAELHSATANFASGRLLGEGSIGCVYRAKYADGKVLAVKKINPSLFHGGPPEEFPQIVSNLSKLHHPNIVELVGYCSEQEHVLIYDYFRNGSLHGFLHLSDDFSKPLTWNTRVRIALGTARAIEYLHEICSPPLLHKNIKSSNILLDTDLNPRLSDYGLASFHQRTSQNLGAGYNAPECTKPSAFTQKSDVYSFGVVMLELLTGRMAFDSSKPKAEQCLVRWASPLLHDINAVEKMVDPALRGLYPPKSLFRFADIIALAVQSEPEFRPPVSELVQSLMRLVQRSSMTMREDFE* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00715 689 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Lapu10g00715 689 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 27 254 - -
Lapu10g00715 689 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 483 687 - -
Lapu10g00715 689 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 371 482 - -
Lapu10g00715 689 SUPERFAMILY L domain-like 25 237 - -
Lapu10g00715 689 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 72 674 - -
Lapu10g00715 689 SUPERFAMILY Protein kinase-like (PK-like) 387 673 IPR011009 -
Lapu10g00715 689 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Lapu10g00715 689 MobiDBLite consensus disorder prediction 300 332 - -
Lapu10g00715 689 Gene3D Ribonuclease Inhibitor 24 262 IPR032675 -
Lapu10g00715 689 MobiDBLite consensus disorder prediction 236 266 - -
Lapu10g00715 689 Gene3D Phosphorylase Kinase; domain 1 365 482 - -
Lapu10g00715 689 MobiDBLite consensus disorder prediction 300 314 - -
Lapu10g00715 689 ProSiteProfiles Protein kinase domain profile. 406 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00715 689 Gene3D Transferase(Phosphotransferase) domain 1 483 688 - -
Lapu10g00715 689 Pfam Protein kinase domain 408 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00715 Lapu-Chr10 9035895 9041774 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00715 7 688 Strubbelig Receptor Gene Family AT1G78980 60.408 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lapu10g00715 PK_Tyr_Ser-Thr 8.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00715 - - gmx:100785529 1118.61