Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00709 ATGATGGATTCAAAGAAGAGTAACAAGATCCGAGAGGTGGTCAGGCTTCAACAAATCCTCAAGAAGTGGAAGAAAGTTGCAACCTCTTCTGCTTCCAACAGTGCAGACACGGTTCCAAAAGGTTTCCTCGCTGTTTGTGTAGGGAAAGAGCTCAAGAGATTCATCATTCCCACCCATTACCTGAGACACCAAGCATTTGAGATGTTGCTCCAAGAAGCCCAGGAGGAATTTGGTTTCCAGCAAGAGGGTGTGCTCAAAATCCCATGCCATGTATCAGTCTTCCAGAAAATACTCAAGGCGGTGGAGGACAACAAACAAGCCTTGCTGCATCACTCAGGCTTCGATGGAGACCATCCTCAAACTTAA 366 0.4645 MMDSKKSNKIREVVRLQQILKKWKKVATSSASNSADTVPKGFLAVCVGKELKRFIIPTHYLRHQAFEMLLQEAQEEFGFQQEGVLKIPCHVSVFQKILKAVEDNKQALLHHSGFDGDHPQT* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00709 121 Pfam Auxin responsive protein 15 100 IPR003676 GO:0009733
Lapu10g00709 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 20 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00709 Lapu-Chr10 8984202 8984818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00709 2 105 Calmodulin-binding Proteins AT4G31320 48.980 4.22e-40 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00709 K14488 - vra:106773901 186.422
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00709 10 8984202 8984818 Lapu10g00709 10 8984202 8984818 ECH