Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00698 ATGAGGGAGAAGGACAAAGAGAAGGAGACCGAGAAGAAGAAGTATCCAATTGGAGCCGAACATTACCTTCTCTACGAAGAGATTGGTCAGGGCGTCAGTGCTGCCGTTCACCGCGCCCTCTGCGTTCCCTTCAACGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAATTGCGATCTGAACAACGTCTCCCGTGAGGCGCAGACAATGATCCTGGTAGACCACCCTAACGTCCTCAAATCACACTGCTCGTTCGTAAGCGAGCACAATCTCTGGGTCGTCATGCCGTATATGTCGGGCGGGTCATGCCTCCACATACTGAAAGCCGCGCACCCCGACGGGTTTGAGGAGGTTGTGATTGCCACCATTCTGAAAGAGGTGTTGAGGGGTTTGGAGTACCTTCACCACCACGGCCACATCCACCGGGACGTCAAGGCCGGCAACATTCTCATCGATTCACGCGGTGCCATCAAGCTCGGCGATTTTGGTGTCTCTGCTTGCCTCTTTGATTCTGGTGACCGCCAACGCACGAGGACTACATTTGTTGGAACACCTTGCTGGATGGCACCGGAGGTCATGGAGCAACTCCACGGCTATAACTTCAAAGCTGACATCTGGTCATTTGGTATTACCGCCTTGGAGCTTGCTCATGGTCATGCCCCTTTCTCAAAATTTCCACCAATGAAGGTACTGCTCATGACTTTGCAAAACGCACCCCCTGGCCTTGACTACGAAAGGGATAGAAAGTTCTCTAAGTCGTTTAAGCAGATGATTGCTAGCTGCTTGGTAAAAGATCCTACAAAACGACCCTCTGCAAGCAAGTTGTTAAAGCATTCCTTCTTTAAGCAGGCTCGCTCCAGTGATCATATTCGAAGGCTCTTGGAGGGGCTGCCTGCTTTAGGTGATCGAATGGAGGCCCTAAAGAGAAAAGAAGAAGATATGCTCGCACAAAAGAAAATGCCTGATGGAAAGATGGAGGAATTATCACAGAATGAATACAAACGAGGAATTAGTGGTTGGAACTTCAATCTTGAAGACATGAAGGCTCAGGCATCCTTGATCCATGATTTCGATGATGTTATGTCAGATATGAATCATGCAGCAAGTTCAAGTTCATTATCTACACTTGATTCACAAGAGAAACAACTACCGAGTGCATTTCACAACCCTTCTCGATCTGCTGATATGGAAGAAAATGATGAGATGCGAAATCAATCAGCTTCTGTTTCTGCAATTGATGCCAAAACTAGGCTTGAAAAATCCGATGATGACTCTAACATCACCTGTTCAAGCCATGAACCACAAATTTATTCATCCTCTCTCGATGATCACGTGGACAATAATTTGGGTGAGAAATCTGACATGGAAAACGGTGGAAGATTTGTGGAGGGAATGTCCACCCATCATCATCATAGAAGAGGATGTTCATCAAGCATCTTACCAGAAGTTGCCCTTCCACCAATTCGACCTGAAAGTGAGAAACCACAAAATCTGTCCCAGAACGGTTCAAGTTGCAATGCAACTTCAGTTCCACAGACCGGAGAGGACGTACTTACTGAACTTCCCTCAAGAGTCTCAAAATCATCAGCTAATTCTGATGACACTGATGAGAAATCGAAAGTACCAGTTGTACAGCAGAGAGGACGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTGGCCCCTTCTCCTGTACTGCAAAAGAGTCATAGCATGCAGGTTTTTAGCCAGCATAATGTTGCTTCTGTACAACCAACTTTGCCATTATTACCAGCATCTGAAGCCACATCATCAAATCTTTCTAGCCACGCTGTCTTTTCTATGTTGCACTCTGTACTGCAGACAAATATTCTTCAACAGGAAAGCATTCTATGTTTAATGAAGATAATTACTTCCGGTGACTTTACAGCTGACGGCTCATGTACCCTAGCACAAATAGCAGGAACTGAAAAATCTTTGCTTGAAGCAGCTCAGGAGAGGGAGAAGGAGTTACTTCATGAGATAACTGATTTGCAATGGAGGCTTATCTGTGCCCAGGAGGAGCTTCATAAAGTCAAAACAGAAAACGCTCAGTGTGGAATGGATGGATGGAGGGAGCTGAGTAAGGAGAAAAGGTTGGTAGATTAG 2139 0.46 MREKDKEKETEKKKYPIGAEHYLLYEEIGQGVSAAVHRALCVPFNEVVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSEHNLWVVMPYMSGGSCLHILKAAHPDGFEEVVIATILKEVLRGLEYLHHHGHIHRDVKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRTRTTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPTKRPSASKLLKHSFFKQARSSDHIRRLLEGLPALGDRMEALKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNLEDMKAQASLIHDFDDVMSDMNHAASSSSLSTLDSQEKQLPSAFHNPSRSADMEENDEMRNQSASVSAIDAKTRLEKSDDDSNITCSSHEPQIYSSSLDDHVDNNLGEKSDMENGGRFVEGMSTHHHHRRGCSSSILPEVALPPIRPESEKPQNLSQNGSSCNATSVPQTGEDVLTELPSRVSKSSANSDDTDEKSKVPVVQQRGRFKVTSENVDPEKVAPSPVLQKSHSMQVFSQHNVASVQPTLPLLPASEATSSNLSSHAVFSMLHSVLQTNILQQESILCLMKIITSGDFTADGSCTLAQIAGTEKSLLEAAQEREKELLHEITDLQWRLICAQEELHKVKTENAQCGMDGWRELSKEKRLVD* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00698 712 SMART serkin_6 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00698 712 FunFam serine/threonine-protein kinase BLUS1 isoform X1 103 335 - -
Lapu10g00698 712 Pfam Protein kinase domain 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00698 712 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 691 IPR047173 GO:0043539
Lapu10g00698 712 Gene3D Phosphorylase Kinase; domain 1 10 98 - -
Lapu10g00698 712 Coils Coil 658 678 - -
Lapu10g00698 712 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Lapu10g00698 712 FunFam Serine/threonine-protein kinase BLUS1 11 99 - -
Lapu10g00698 712 MobiDBLite consensus disorder prediction 373 458 - -
Lapu10g00698 712 SUPERFAMILY Protein kinase-like (PK-like) 20 284 IPR011009 -
Lapu10g00698 712 ProSiteProfiles Protein kinase domain profile. 22 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00698 712 MobiDBLite consensus disorder prediction 532 546 - -
Lapu10g00698 712 MobiDBLite consensus disorder prediction 495 518 - -
Lapu10g00698 712 CDD STKc_OSR1_SPAK 20 283 - -
Lapu10g00698 712 Gene3D Transferase(Phosphotransferase) domain 1 103 336 - -
Lapu10g00698 712 MobiDBLite consensus disorder prediction 430 446 - -
Lapu10g00698 712 MobiDBLite consensus disorder prediction 373 391 - -
Lapu10g00698 712 MobiDBLite consensus disorder prediction 489 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00698 Lapu-Chr10 8906459 8915064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00698 11 678 MAP Kinase Kinase Kinase Kinase AT1G79640 65.339 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lapu10g00698 Pkinase 3.3e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00698 K08835 - gmx:100780339 1216.83