Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00696 ATGAGGCCTATGCAACTCCCACCGCCTTCTGCCTCCGGCTCCGCCACCGCCTCCGCTCCCCCGCCCACCAACTCCAAGGATCACCGTCCCCAGCGCCGCCGCAAGGACCTCACGCTTCCGCTGCCCCAGCGTGACACCAATTTGGCCGTGCCGCTTCCTCTTCCACCATCCACGGCCACGGCCGCTGCCAGCGGCGGACCTAGCCAGCAGCAGCAGCAGCAGGTGATCCCGTTCGCGGAGCTGGAGAGACTCAACCGCATCGGGAGCGGGAGCGGGGGCACAGTGTACAAGGTGGTCCACAGAACGAGCGGGCGCGTGTACGCGCTGAAGGTGATATACGGGCACCACGAGGAGTCGGTGCGGCGGCAGATCCACCGGGAAATCCAGATCTTGCGCGACGTGGACGATGTGAACGTGGTGAAGTGTCACGAGATGTACGATCAGAACAGCGAAATCCAGGTGCTGCTGGAGTTCATGGACGGGGGATCTCTGGAGGGGAAACACATCCCGCAGGAGCAGCAGCTGGCAGATCTGTCGAGGCAGATTCTGCGGGGGCTGGCGTACCTGCACCGGCGGCACATCGTGCACAGGGACATCAAGCCCTCGAATCTGCTGATAAACTCGCGGAAGCAGGTGAAGATCGCGGACTTCGGAGTGGGTCGGATCCTGAACCAGACCATGGATCCGTGCAATTCGTCGGTGGGGACGATCGCCTACATGAGTCCCGAGAGGATCAACACGGACATAAACGACGGGCAATACGACGCGTACGCCGGGGACATATGGAGCTTTGGGGTGAGCATCTTGGAGTTCTACATGGGCAGGTTTCCCTTCGCTGTTGGGAGGCAGGGCGATTGGGCAAGCCTCATGTGTGCTATTTGTATGTCTCAGCCACCCGAGGCTCCTCCTTCTGCTTCCCCCCACTTCAGGGACTTCATCTCCCGATGCCTCCAACGCGACCCCTCCCGCCGCTGGTCTGCCTCCAGGCTCCTCGAACACCCCTTCATTGCCCCTCCCCACTCCAACCACAATCAGCTTCCTCCCAATCTCCACCAGCTCCTTCCCCCTCCTCCTCCCAGGCCTCTCCCCTCCTAG 1095 0.6228 MRPMQLPPPSASGSATASAPPPTNSKDHRPQRRRKDLTLPLPQRDTNLAVPLPLPPSTATAAASGGPSQQQQQQVIPFAELERLNRIGSGSGGTVYKVVHRTSGRVYALKVIYGHHEESVRRQIHREIQILRDVDDVNVVKCHEMYDQNSEIQVLLEFMDGGSLEGKHIPQEQQLADLSRQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSFGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPPSASPHFRDFISRCLQRDPSRRWSASRLLEHPFIAPPHSNHNQLPPNLHQLLPPPPPRPLPS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00696 364 CDD PKc_MAPKK_plant_like 79 336 - -
Lapu10g00696 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Lapu10g00696 364 MobiDBLite consensus disorder prediction 1 73 - -
Lapu10g00696 364 SUPERFAMILY Protein kinase-like (PK-like) 81 357 IPR011009 -
Lapu10g00696 364 MobiDBLite consensus disorder prediction 9 25 - -
Lapu10g00696 364 Gene3D Phosphorylase Kinase; domain 1 58 160 - -
Lapu10g00696 364 ProSiteProfiles Protein kinase domain profile. 81 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00696 364 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 21 338 - -
Lapu10g00696 364 FunFam Mitogen-activated protein kinase 2 161 347 - -
Lapu10g00696 364 Pfam Protein kinase domain 82 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00696 364 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Lapu10g00696 364 FunFam Mitogen-activated protein kinase 2 61 160 - -
Lapu10g00696 364 Gene3D Transferase(Phosphotransferase) domain 1 163 348 - -
Lapu10g00696 364 MobiDBLite consensus disorder prediction 26 40 - -
Lapu10g00696 364 SMART serkin_6 81 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00696 Lapu-Chr10 8895858 8899519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00696 1 352 MAP Kinase Kinase Gene Family AT1G51660 68.595 5.15e-170 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lapu10g00696 Pkinase 1.4e-64 CL0016