Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00690 ATGAGAGGCTCATGGAAGCTCACATGTGCCCTCTTGCTACTCATCTCCGCCGTAGCCACCGCCACTGACCACATTGTGGGTGCCAACCGTGGCTGGAACCCTGGCATCAACTACACTCTTTGGGCCAACAACCACACTTTCTTTGTCGGCGACCTTATCTCATTCAGGTACCAAAAAAACCAATACAATGTGTTTGAGGTGAACCAAACTGGGTATGACAACTGTACCATGGAAGGGGCAGTGGGGAATTGGAGTAGTGGCAAAGATTTCATACCCCTGAATAAGGCCAAGAGATATTACTTCATTTGTGGGAATGGCCAATGCTTCAGTGGAATGAAGGTGTCTGTTGTTGTCCATCCACTCCCTCCACCTCCCAACTCTGCACTTGCTGCTGAACATTCAAAGCCAAACTCTGCTTCTCCTGTGCTCTTCAAACGCTCTCTGCTGCTGTCTTCTGTTTTGGCCTGCTTTGGATTTGTTTGGATGTAA 489 0.4867 MRGSWKLTCALLLLISAVATATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFRYQKNQYNVFEVNQTGYDNCTMEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFSGMKVSVVVHPLPPPPNSALAAEHSKPNSASPVLFKRSLLLSSVLACFGFVWM* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00690 162 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
Lapu10g00690 162 Pfam Plastocyanin-like domain 32 112 IPR003245 GO:0009055
Lapu10g00690 162 PANTHER BLUE COPPER PROTEIN 20 131 IPR039391 GO:0009055
Lapu10g00690 162 Gene3D - 20 121 IPR008972 -
Lapu10g00690 162 FunFam Lamin-like protein 20 121 - -
Lapu10g00690 162 CDD Phytocyanin_like_1 22 113 - -
Lapu10g00690 162 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00690 Lapu-Chr10 8869715 8870476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00690 7 128 Phytocyanin Superfamily AT5G15350 42.969 4.47e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00690 - - pvu:PHAVU_010G162400g 309.301