Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00683 ATGTCTCTAAAGATAGCAGCAGAAATCTATCCAAAATCACCATCAGAGACAGTGGAGGAACCATTGATTGTGGTAAACGAATATGATGAAGATAAACACAAGGTGGCAGTAGAGAAACTTGAGAGGCTTTGTGAAATTGGGCAGAGTGGAAAGCCATCTCTTGTCACTGACCTCATGGGAGACCCCATATGCCGTATCCGTCACTTTCAGTTGCATGTCATGCTGGTTGCAGAATATGGAGAAGAAGGAGAAGTTGTTGGGGTGATAAGGGGGTGTGTAAAAACAGTTACAAGAGGGAATTCGGTTTATGTAAAACTGGCCTATATTTTGGGGCTCAGAGTCTCCCCTCGACACAGGAGATTTGGCATTGGCACAAAACTAGTTGAACATTTAGAAGAGTGGTGCAAGAAAAAAGGGGCCAAGTATGCATATATGGCAACTGATTGTACCAATGAGCCTTCCGTGAATTTGTTCACAAAAAAATGTGGGTACTCAAAGTTCAGGACTCTAACCATACTAGTGCAACCTGTGCATGCTCACTACAAACCAATCAGCTCCAATGTTGCTGTGCTTCGCCTTCCACCACGCCTAGCAGGGTCCATGTATAACCAACTGTTTGCCAATTCAGAATTTTACCCTAAAGACATAGACTTAATCCTGTCCAACAAGCTGAATTTGGGGACTTTCATGGCCATCCCCAAGAAGTACCTGTCCAAGTGTGATCCAAAAAGGGGCATTCTCCCTCCAAGCTATGCAATATTAAGCGTGTGGAACACCAAAGATGTGTTCAAATTGCAAGTGAAGGGTGTGTCACCATTGGCACATGCCTGCTGCGTAGGTACGAGGTTGTTGGATGAATGGATGCCATGGCTAAGGCTACCTTCATTTCCGGATGTTTTTAGGCCATTTGGGGTTTATTTTGTGTATGGACTACACATGGAGGGAAAGTGCGGTGCTCAACTGATGAAGTGCTTATGTGGATTTGTGCATAACATGGCAAGAGATGATGGTGGTTGTGGGGCCATTGTGGCTGAACTGGGCCAAAGGGACCCAGTCAGAGACGCAGTCCCACATTGGAGCAAGTTCTCATGGGCAGAGGACATGTGGTGCATTAAGAATCTTCACAAGGATATCCCTCAAACTTCTGATTGGTTCACTTCTAGATCCTCTTCATCAGTAATATTTGTTGATCCTCGAGATTTTTGA 1206 0.4478 MSLKIAAEIYPKSPSETVEEPLIVVNEYDEDKHKVAVEKLERLCEIGQSGKPSLVTDLMGDPICRIRHFQLHVMLVAEYGEEGEVVGVIRGCVKTVTRGNSVYVKLAYILGLRVSPRHRRFGIGTKLVEHLEEWCKKKGAKYAYMATDCTNEPSVNLFTKKCGYSKFRTLTILVQPVHAHYKPISSNVAVLRLPPRLAGSMYNQLFANSEFYPKDIDLILSNKLNLGTFMAIPKKYLSKCDPKRGILPPSYAILSVWNTKDVFKLQVKGVSPLAHACCVGTRLLDEWMPWLRLPSFPDVFRPFGVYFVYGLHMEGKCGAQLMKCLCGFVHNMARDDGGCGAIVAELGQRDPVRDAVPHWSKFSWAEDMWCIKNLHKDIPQTSDWFTSRSSSSVIFVDPRDF* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00683 401 Gene3D - 26 169 - -
Lapu10g00683 401 Pfam Acetyltransferase (GNAT) family 74 164 IPR000182 GO:0016747
Lapu10g00683 401 CDD NAT_SF 74 144 - -
Lapu10g00683 401 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 20 401 - -
Lapu10g00683 401 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016747
Lapu10g00683 401 FunFam Putative N-acetyltransferase HLS1 38 169 - -
Lapu10g00683 401 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 72 171 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00683 Lapu-Chr10 8828639 8830896 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lapu10g00683 Acetyltransf_1 2.6e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00683 - - gmx:100799977 770