Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00679 ATGGACTGTTCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCCACGCAGAGTTCATGAAGAAGTTCCCAAGGAGGTAGAAAGCAAGCTTTTCTCCTTGGGAATGTCCAAGTTTAAAGTGGAAGAAGAGTCTACTGGTGACTTGGAGGAGGAACTGAAGCGGGTGACAGCAGAAAACAAGAAGTTGGCTGAAATGCTCTCGGTGGTGTGTGAGAACTACAACAGTTTGAGAAGCCATTTGATGGAATATATGAGCAAAAGTGGTGAAAAAGAGACCAGCCCAACAGCAAAGAAAAGGAAGTCTGAAAGCAGCAACAACAATAGTATTTGTGTGTTGGGAACTAACAATGGAAACTCCGAGAGCAGCTCCACTGATGAAGAATCTTGCAAGAAGCCGAGGGAAGAAACCATCAAACCAAAAATTTTAAGAGTTTATGTCAGGACCGAAGCATCTGACACTACCCTTATTGTGAAAGATGGATACCAGTGGAGGAAATATGGGCAAAAGGTGACCAGAGATAACCCTTGTCCAAGAGCATATTTCAAATGCTCTTTTGCTCCAAGCTGCCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTGGCTACTTATGAAGGGGAGCACAATCATCCCCAGGCTTCTTCCCAAATGGAGGCAACATCAGGTTCTGGCCGTAGTGTGACCCTTGCTTCAGTGCCTTGTTCCGCATCTCTCAGCACTTCCACTCCAACACTTGTTACCCTTGACTTGACAAAATCTAAGGGCAGCAACGATTCCAAGAGCACGAAAACTAAAGCAGATTCACCTAAAGTACAGCAGGTTTTGGTGGAACAGATGGCCACTTCTTTGACCACAGATCCTAATTTCAGAGCAGCACTTGTTGCTGCCATCTCAGGAAGATTGTTGCACAATAATTAA 939 0.442 MDCSSWINTSLDLNINPRRVHEEVPKEVESKLFSLGMSKFKVEEESTGDLEEELKRVTAENKKLAEMLSVVCENYNSLRSHLMEYMSKSGEKETSPTAKKRKSESSNNNSICVLGTNNGNSESSSTDEESCKKPREETIKPKILRVYVRTEASDTTLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHPQASSQMEATSGSGRSVTLASVPCSASLSTSTPTLVTLDLTKSKGSNDSKSTKTKADSPKVQQVLVEQMATSLTTDPNFRAALVAAISGRLLHNN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00679 312 MobiDBLite consensus disorder prediction 87 135 - -
Lapu10g00679 312 ProSiteProfiles WRKY domain profile. 154 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu10g00679 312 Pfam WRKY DNA -binding domain 160 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu10g00679 312 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 35 308 IPR044810 GO:0003700
Lapu10g00679 312 Coils Coil 47 67 - -
Lapu10g00679 312 MobiDBLite consensus disorder prediction 101 125 - -
Lapu10g00679 312 FunFam WRKY transcription factor 40 144 221 - -
Lapu10g00679 312 Gene3D WRKY domain 144 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu10g00679 312 SUPERFAMILY WRKY DNA-binding domain 155 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu10g00679 312 SMART WRKY_cls 159 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu10g00679 312 MobiDBLite consensus disorder prediction 257 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00679 Lapu-Chr10 8807918 8810086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00679 4 312 WRKY Transcription Factor Family AT1G80840 53.750 2.49e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu10g00679 WRKY 3.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00679 - - gmx:100807966 533.102