Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00677 ATGGATCCGCAAAACGGGCACGCCCAAGGTCACCCCAGGAACATAATCTTCAACAAATACGAGATGGGGCGGGTGCTCGGGCAGGGGAACTTCGCCAAGGTCTACCATGGCAGAAACCTCGTCACCAACGACAACGTAGCGATCAAGGTCATAAAGAAAGAGAAGCTGAAGAAAGAGCGACTCGTGAAGCAGATCAAACGTGAGGTTTCGGTGATGAAACTGGTGCGGCATCCCCACATCGTTGAACTCAAGGAAGTGATGGCCACCAAGGGGAAAATCTTCCTCGTCATGGAATTCGTCAAGGGCGGCGAACTCTTCACCAAAGTTAACAAAGGAAAACTCTCCGAAGACCTCGCCAGAAAGTACTTCCAACAACTCATCAGCGCCGTCGACTACTGTCACAGCCGCGGTGTCACCCACCGCGACCTCAAGCCGGAGAATCTCCTTTTGGACCAGAACGAGGATCTCAAAGTCTCCGACTTTGGACTCTCCGCATTGCCGGAGCAGCGCCGGGACGACGGCATGCTTGTGACGCCGTGTGGCACCCCTGCTTATGTGGCACCGGAGGTTCTGAAGAAAAAGGGCTACGATGGCTCAAAGGCTGACATATGGTCCTGTGGGGTAATTCTCTACGCCTTGCTCTGTGGCTATTTACCCTTCCAAGGCGAGAACGTAATCAGAATTTATCGAAAAGCGTTCAGAGCTCAATACGAATTACCCGAATGGGTTTCTCCTCAGGCCAAAAATCTCATTTCGAATCTCCTCGTGGCTGATCCTGCAAAGAGGTATTCTATTCCCGATATAATGAAGGACCCTTGGTTTCAATTTGGGTTCATGAGGCCCATGGCGTTTTCAATCAAGGAGTCCGAGGTAGAAGACAACATTGATTTCGACGATGTTGGCAACAACGAGGATGAGGTTACAATGAGGAAACCCACGAGGCCGTTTTACAATGCCTTTGAAATAATCTCATCCTTGTCACACGGCTTTGATCTTAGGAATTTGTTTGAGACGAGGAAACGGTCGCCCTCGATGTTTATCTGTAAATTTTCGGCTTCGGCGGTGATGGCGAAGGTGGAGGCTGCGGCGAAGAAGCTGAATTTTAAAGTAACGGTGAAGAAGGAGTTTGCGGTGAGGATGCAGGGGGCGGAGGAAGGGAGGAAGGGGAAGTTGGCAATGACGGTGGAGGTTTTTGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTTTCTAAGTCTGCCGGAGACACTTTGGAGTATGTTAAATTGTGTGAGGAACAAGTGAGACCATCTCTGAAAGATGTTGTTTGGAGTTGGCAGGGTGATAGTAACAACTCCTCCAACAATTAG 1347 0.5048 MDPQNGHAQGHPRNIIFNKYEMGRVLGQGNFAKVYHGRNLVTNDNVAIKVIKKEKLKKERLVKQIKREVSVMKLVRHPHIVELKEVMATKGKIFLVMEFVKGGELFTKVNKGKLSEDLARKYFQQLISAVDYCHSRGVTHRDLKPENLLLDQNEDLKVSDFGLSALPEQRRDDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLCGYLPFQGENVIRIYRKAFRAQYELPEWVSPQAKNLISNLLVADPAKRYSIPDIMKDPWFQFGFMRPMAFSIKESEVEDNIDFDDVGNNEDEVTMRKPTRPFYNAFEIISSLSHGFDLRNLFETRKRSPSMFICKFSASAVMAKVEAAAKKLNFKVTVKKEFAVRMQGAEEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYVKLCEEQVRPSLKDVVWSWQGDSNNSSNN* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00677 448 Gene3D Transferase(Phosphotransferase) domain 1 13 319 - -
Lapu10g00677 448 FunFam Non-specific serine/threonine protein kinase 313 436 - -
Lapu10g00677 448 FunFam Non-specific serine/threonine protein kinase 12 99 - -
Lapu10g00677 448 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00677 448 FunFam Non-specific serine/threonine protein kinase 13 312 - -
Lapu10g00677 448 Coils Coil 48 68 - -
Lapu10g00677 448 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
Lapu10g00677 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lapu10g00677 448 CDD CIPK_C 318 432 - -
Lapu10g00677 448 ProSiteProfiles NAF domain profile. 312 337 IPR018451 GO:0007165
Lapu10g00677 448 SUPERFAMILY Protein kinase-like (PK-like) 16 315 IPR011009 -
Lapu10g00677 448 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 432 - -
Lapu10g00677 448 Pfam NAF domain 316 371 IPR004041 GO:0007165
Lapu10g00677 448 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00677 448 Gene3D Kinase associated domain 1, KA1 320 437 - -
Lapu10g00677 448 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00677 Lapu-Chr10 8790520 8793081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00677 13 447 CBL-interacting serine-threonine protein kinases AT5G10930 62.754 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lapu10g00677 Pkinase 2.3e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00677 - - vun:114167214 785.408